Gene Rxyl_0869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0869 
Symbol 
ID4117199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp909864 
End bp910895 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content70% 
IMG OID638035652 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein 
Protein accessionYP_643648 
Protein GI108803711 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGCCTA TGGACAACGA CGTAATCCTA CGGGTTAGGG ACCTGCGGGT CTCCTTCAGC 
ACCTACGCGG GCAGGGTGGA GGCCGTCCGC GGGGTCTCCT TCGACCTCCG GCGGGGCGAG 
ACCCTCGCCA TCGTGGGGGA GTCGGGCAGC GGCAAGAGCG TCACGGCGAA GAGCCTGATG 
CGCCTGCTGC CGGAGGCGAA CAGCACCATC GAGGGGGGCG AGGCCCTCTT CGATGGCAAG 
GACCTCCTGA AGCTCCCCGA GCGGCAGATG CGCGGCATCC GGGGCCGCAG GATCTCCATG 
ATCTTCCAGG ACCCGATGAC CTCGCTCAAC CCGACGATGA AGGTGGGGCG GCAGATCGCG 
GAGAGCCTGA AGCGCCACCT GGGCCTCTCG GGGCGCGCGG CCCGGGAGCG GGCCGTGGAG 
CTCTTGAGGA TGGTCGGCAT CCCCAGGCCG GAGGCGCGGG TGGACCAGTA CCCGCACCAG 
TTCTCCGGCG GCATGCGCCA GCGGGTGGTC ATCGCCATAG CCCTCGCCTG CGACCCGGAC 
GTCCTCATCG CCGACGAGCC CACCACCGCG CTCGACGTGA CCATCCAGGC CCAGATCCTG 
CAGCTGCTGC GCGACCTGCA GGAGCGGCGG GGGCTCTCGG TGATCCTGAT CACGCACGAC 
CTCGGGGTGG TGGCGGAGGT CTCGCACCGG GTGGCGGTGA TGTACGCCGG GAAGGTCGTG 
GAGACGGGCA CGGTGCACGA GATCTTCCGC GACCCGAAGC ACCCCTACAC CTGGGGGCTC 
CTGACCTCGG TGCCGCTCCC CACGCTGGAC CGCAGCCGGG AGCTGGTGCC GATCTCGGGC 
TCGCCCCCGA ACCTCCTGCA CCCCCCGCAG GGCTGCCCGT TCACCGCCCG GTGCCCGCAC 
GCGATGAAGA TCTGCGCCAT GGAGATGCCG GAGTACACGG TCTTCTCGGA CGAGCACCGG 
GCGGCCTGCT GGCTGCACCA CGAGCTGGCC CCGAAGGTGA GGCCGCCGGC GCAGGTGGGG 
GGTAGCCGGT GA
 
Protein sequence
MKPMDNDVIL RVRDLRVSFS TYAGRVEAVR GVSFDLRRGE TLAIVGESGS GKSVTAKSLM 
RLLPEANSTI EGGEALFDGK DLLKLPERQM RGIRGRRISM IFQDPMTSLN PTMKVGRQIA 
ESLKRHLGLS GRAARERAVE LLRMVGIPRP EARVDQYPHQ FSGGMRQRVV IAIALACDPD 
VLIADEPTTA LDVTIQAQIL QLLRDLQERR GLSVILITHD LGVVAEVSHR VAVMYAGKVV 
ETGTVHEIFR DPKHPYTWGL LTSVPLPTLD RSRELVPISG SPPNLLHPPQ GCPFTARCPH 
AMKICAMEMP EYTVFSDEHR AACWLHHELA PKVRPPAQVG GSR