Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0844 |
Symbol | |
ID | 4117134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 882062 |
End bp | 883003 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638035627 |
Product | phytoene synthase |
Protein accession | YP_643623 |
Protein GI | 108803686 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGGTGG ACCCGGCCCG GGCGGCGCTC GTGGATGGCG GGCTCTCGCT GGAGGAGTGC TACGGGCTCT GCCGCAGCAT CCAGCGGGCC CACAGCAGAA CCTACTACTT CTCCACCCGC CTGCTGGAGC CGGAGGTCCG GCGCGGGGTG CACGCCCTCT ACGCTTTCAT GCGCTACGCC GACGAGATCG TGGACAACCC CGGGAGGCTC CCCCCCGAGG GGCAGCTCGC GGCCCTGGAG AGGCTGGAGG AGGAGGCGCT CGCCGCCTGC CGCGGCGGGC GGACCGAGAA CCCGGTGCTC CGGGCCTTCG CCGACACGGC GCGCCGCTGC GGCATAGAGG AGCGCAACGT GCGCGCCTTC ATGCGTAGCA TGAAGATGGA CACCAGCGTA ACCCGCTACC CCACCTACCG GGAGCTCGAG GAGTACACCT ACGGCAGCGC GGCGGTCGTG GGGATCATGA TGTGCCGGGT GCTCGGGGTG GAGGACGAGC GGGCCTACCC GCACGCCGAG GCCCTCGGCA CGGCCATGCA GCTCACCAAC TTCCTGCGGG ACATCGCCGA GGACTGGCGG CGGGGGCGTG TATACCTGCC GCTGGAGGAC CTCGAGCGGT TCGGCTACCG GGAGGAGGAG CTCGGAGAGG GGGTGGTGGA CGGGCGCTTC GCCGGGCTCA TGCGGTGCGA GATCCTGCGG GCCCGCGGGC TGTACGCCAC GGCCGACGAG GGGATGGGGT ACATCCCGCG CGGGCGGCGG TACGCGGTGC TCGTGGCCCG GCGGCTCTAC GCCGCCATCC TCGACAGGAT CGAGGAGGCC GGCTACGATG TCTTCTCCCG CCGGGCGGAG ACCACCTGGC CGCAGAAGCT CGCGCTGGCC GCCGGCTGCG CCTTCCGGGA GCCGGGGGAG GTCTTGGGGC TCTGCCCGGT CAGGATTGCA ACCGGGCCGT GA
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Protein sequence | MRVDPARAAL VDGGLSLEEC YGLCRSIQRA HSRTYYFSTR LLEPEVRRGV HALYAFMRYA DEIVDNPGRL PPEGQLAALE RLEEEALAAC RGGRTENPVL RAFADTARRC GIEERNVRAF MRSMKMDTSV TRYPTYRELE EYTYGSAAVV GIMMCRVLGV EDERAYPHAE ALGTAMQLTN FLRDIAEDWR RGRVYLPLED LERFGYREEE LGEGVVDGRF AGLMRCEILR ARGLYATADE GMGYIPRGRR YAVLVARRLY AAILDRIEEA GYDVFSRRAE TTWPQKLALA AGCAFREPGE VLGLCPVRIA TGP
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