Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0834 |
Symbol | gatB |
ID | 4117086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 870749 |
End bp | 872254 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638035618 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
Protein accession | YP_643614 |
Protein GI | 108803677 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.211661 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCACC GGCACGGGTT CCCCGAGAAG CGCGAGGTGC ATGGCGGCTT GGAGCTAAAG GACAGGAAAG CTTACCAGGC GGTGATCGGG CTGGAGTTCC ACGTCCACCT CTCCACCCGC ACCAAGATGT TCTGCGGCTG CCGGGTGACC TACGGCGAGC CGCCCAACAC CCACGTCTGC CCGGTCTGCC TGGGGCACCC GGGCGCGCTG CCCGTGGCCA ACGAGCGGGC CGTGGAGCTC GGGGTGATGG CCGGGCTCGC GCTCAACTGC CGGGTCGCCG GGCGGGCCGT CTTCGCCCGC AAGAACTACT TCTACCCCGA CCTGCCGAAG GGCTACCAGA TCTCCCAGTA CGAGGAGCCC ATCTGCACCG GCGGGCACAT AGACGTGCCC ACCTCCGAGG GCACGGTGCG GGTCAGGATC CGGCGGCTGC ACCTGGAGGA GGACACGGCC AAGAACGTCC ACGTGGGCGA GTCGGGCCGG ATGCACGGCT CGGTGGGCTC GCTCATAGAC TTCAACCGCA GCGGGGTGCC GCTCATGGAG ATCGTCACCG AGCCAGACAT CCCCTCCCCC GAGGCGGCCC GGCAGACCGC CGTGCGGCTG CGGGAGATCC TGCAGGCAGT AGGGGCCTCG GAGGCGGACA TGGAGAAGGG CCAGATGCGC TGCGAGGCCA ACGTCTCGCT GCGCAACCCG GACGGCACGC CCGGCACCCG CACGGAGCTC AAGAACATCA ACTCGTTCCG CTTTATGGAG CGGGGGCTGG TGCGGGAGCT GCGGCGCCAG CGGGAGGTGC TGGAGTCCGG CGGCCGGGTG GAGCAGGCCA CCATCCACTA CGACCCGGTC GCCGACGAGG TGCACGAGCT GAGGAGCAAG GAGTTCGCCG AGGACTACCG CTACTTCCCG GAGCCGGACC TGCTGCCGCT GCAGCTCTCC CCGGCCTGGG TGGAGGAGCT CCGCCGGCGC CTTCCGGAGC TCCCGGAGCA GACCCGCCGC CGCTTCGTCG AGCAGTACGG CCTCTCGGAG GCCGACGCCG CGGTGCTCGC CGCCGAGAGG GAGCTTGCCG CCTTCTACGA GAGGGTGGCC TCGGAGGCGG ACCCCCGGCA GGCGGCCAAC TGGATCTCCG GCGACCTCCG GGCGCTGCTG AACGAGGCGC AGGTCGGCAT CTCCGGCTCG AAGGTCCGCC CGGAGCACCT GGTGGAGCTG ATACGGCTCG TCCAGGAGGG CACCATCTCC CGCTCCGCCG CCAAGACGGT GCTCGGCCGC GTCTTCGAGA GCGGCGAGCG CCCCTCGCGC GTCGTCGAGC GCGAGGGGCT CGCCCAGATG GGGGCCGACG AGCTCGGCGG GATAGTGGAC GAGGTGATCT CCTCGAACCC CGAGGAGGCC GAGCGGGTGA GGAACGGCGA CCAGAAGGTG GTGGGCTTCC TGATCGGCCA GGTGATGCGG GCCACCCGGG GCCAGGCCGA CGGCGGCCGG GTGCGCCAGC TGATCCTGGA GCGGCTCGGC TCCTAG
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Protein sequence | MSHRHGFPEK REVHGGLELK DRKAYQAVIG LEFHVHLSTR TKMFCGCRVT YGEPPNTHVC PVCLGHPGAL PVANERAVEL GVMAGLALNC RVAGRAVFAR KNYFYPDLPK GYQISQYEEP ICTGGHIDVP TSEGTVRVRI RRLHLEEDTA KNVHVGESGR MHGSVGSLID FNRSGVPLME IVTEPDIPSP EAARQTAVRL REILQAVGAS EADMEKGQMR CEANVSLRNP DGTPGTRTEL KNINSFRFME RGLVRELRRQ REVLESGGRV EQATIHYDPV ADEVHELRSK EFAEDYRYFP EPDLLPLQLS PAWVEELRRR LPELPEQTRR RFVEQYGLSE ADAAVLAAER ELAAFYERVA SEADPRQAAN WISGDLRALL NEAQVGISGS KVRPEHLVEL IRLVQEGTIS RSAAKTVLGR VFESGERPSR VVEREGLAQM GADELGGIVD EVISSNPEEA ERVRNGDQKV VGFLIGQVMR ATRGQADGGR VRQLILERLG S
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