Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0831 |
Symbol | |
ID | 4117083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 866802 |
End bp | 867782 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638035615 |
Product | LacI family transcription regulator |
Protein accession | YP_643611 |
Protein GI | 108803674 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0569804 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATGC GGGACGTGGC CCGGCGGGCG GGGGTTTCGC CGGCGACGGT ATCGCGGGTG CTCAACGGGG TACCGACGGT GGGGGAGGAG CACCGCCGGC GGGTGCTGCG GGCGATCGAG GAGCTCGGGT ACAGGCCGAA CCGGCTGGCG AGCAACCTGC GGCGCCAGAA GGCCGAGATG ATCGGGGTGG TCGTCTCGGA CATCGAGAAC CCGCACTTCA CCGGGATGGT GCGGGCGGTG GAGGATGCGG CCTACCGGAA GGGGTACAGG GTTCTGCTGT GCAACACCGA CGAGACGCCG CAGAAGCAGC GTTCCTACCT GGAGGTGCTG GCGGCCGAGC GGGTGCTGGG GGTCATCCTC TCCCCCTCGG ACCCGGAGGA CGAGGAGATA GGCGAGCTTC TGGACCTCGG GATCCCGGTG GTGGCCTTCG ACCGGACGGT GGCCGACCCG CGGGCGGACG CGGTGGTGGT GGACAACGTC GGCGGGGTGC GCGCGGCGAC GCGCCGGCTC GTGGCGGCCG GGCACGAGCG GATAGGCTTC GTCGGCGGCT CGGAGGGGAT AGAGACGGGG AGCGGGCGGC TGGCCGGCTA CCGGGAGGCG ATGCTGGAGG CGGGGTTGGA GCCGCGCGTG GCCCACGGGG GCTTCAGGAT AGAGGGGGGG TGGGAGGCCA CGCGGCGGCT GCTGTCCGAG GGGCTCACCG CGCTCGTCGT GGGCAACAAC CTCATGACCA TCGGGGCGCT CAGGGCGCTG CGCGAGATGG GGTTGAGGGT GCCCCGGGAC CTCGCGCTCG TCGCCGTCGA CGACCCGTTC TGGGCCGAGC TCGTCGAGCC GCCGCTCACC ACGCTGGCGC AGCCGGTGCG CGAGATGGCC GGTTGCGCCA TGCGGATGAT GCTGGAGAGG ATCTCGGGCG AGCGGAGCGA GCCCCGCAGG GAGGTCTTCG AGTTCGAGCT GAGGGTCCGC GGCTCCTGCG GGACCGCGTA G
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Protein sequence | MKMRDVARRA GVSPATVSRV LNGVPTVGEE HRRRVLRAIE ELGYRPNRLA SNLRRQKAEM IGVVVSDIEN PHFTGMVRAV EDAAYRKGYR VLLCNTDETP QKQRSYLEVL AAERVLGVIL SPSDPEDEEI GELLDLGIPV VAFDRTVADP RADAVVVDNV GGVRAATRRL VAAGHERIGF VGGSEGIETG SGRLAGYREA MLEAGLEPRV AHGGFRIEGG WEATRRLLSE GLTALVVGNN LMTIGALRAL REMGLRVPRD LALVAVDDPF WAELVEPPLT TLAQPVREMA GCAMRMMLER ISGERSEPRR EVFEFELRVR GSCGTA
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