Gene Rxyl_0814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0814 
Symbol 
ID4116190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp847856 
End bp849478 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content67% 
IMG OID638035598 
Productchaperonin GroEL 
Protein accessionYP_643594 
Protein GI108803657 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02348] chaperonin GroL 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000301367 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGCACA AGGAGTTGAA GTTCAACACC GAGGCGCGGC AGGCTCTGGA GAGGGGTGTA 
AACAAGCTTG CCGACGCGGT CAAGGTCACG CTCGGGCCCA AGGGCCAGTA CGTGGTGCTT
GACAAGAAGT TCGGTTCGCC GACGATCACC AACGACGGCG TAACCATTGC CCGGGAGATC
GAGCTCGAGG ACATCTTCGA GAACCAGGGT GCGCAGCTTC TGAAGGAGGT TGCGACCAAG
ACCAACGACG TGGCCGGCGA CGGGACCACC ACGGCCACGG TTCTGGCGCA GATCATCGTT
CGGGAGGGGC TCAAGAACGT CGCTGCTGGG GCCAACCCGG TCATCCTGCG CAACGGGATA
GAGAAGGCCG TTGAGAAGGC GGTCGAGGCC ATCCGGGAGC AGGCCAAGGA GATCTCCGGC
AAGGATGAGA TCGCCCGGGT GGGTGCGATC TCCGCGCGCA GCGAGGAGGT CGGCAACGTC
ATCGCCGAGG CCATCGACAA GGTCGGCAAG GACGGCGTGG TCAACGTCGA GGAGGGCCAG
ACCCTCGGCA TCGACCTCGA GTTCACCGAG GGGATGCAGT TCGACAAGGG CTACCTCTCG
CCGTACTTCG TCACCGATCA GGACCGGATG GAGGCGGTGC TCGAGGACCC CTACATCCTC
ATCGCCAACC AGAAGATCAG CAACGTCCAG GACCTGCTGC CGCTGCTCAA CCAGGTGATG
CAGGCCAACA AGCCGCTCCT GATCATCGCC GAGGACGTCG AGGGCGAGGC GCTGGCGACC
CTGATCGTCA ACAAGCTGCG CGGCACCTTC CAGTCCTGCG CGGTGAAGGC CCCGGGCTTC
GGTGACCGCA GGAAGCGGAT GATGGAGGAC ATCGCCATCC TCACCGGCGG CGAGGTCATC
ACCGAGGAGC TCGGCCTCAA GCTGGAGAAC ACCCAGCTCT CGCAGCTCGG CCGGGCCCGC
AAGGTCGTGG TCACCAAGGA CGACACCACC ATCGTCGACG GTGCCGGCGA TCCCGAGCAG
ATAAAGGGCC GGATCAACCA GATCAAGGCC GAGCTCGAGA CCACCGACTC CGACTTCGAC
CGCGAGAAGC TGCAGGAGCG GCTGGCCAAG CTCGCCGGCG GCGTGGCGGT CATCAAGGTC
GGCGCCGCCA CCGAGACGGA GCTCAAGGAG AAGAAGCACC GCGTCGAGGA CGCCCTCTCG
GCCACCCGGG CGGCCCTCGA GGAGGGCATC GTCCCCGGCG GCGGCGTGGC GCTGCTGAAG
GCCCAGAAGG CCGTGGGCGA GCTGCTCGAT GAGCTCGACG GCGACGAGCG GACCGGCGCG
CGCATCGTCT ACCGGGCGCT GGAGGAGCCG ATCCGCCAGA TCGCCGAGAA CGCCGGCGCC
GACGGCTCCA TCGTGGTGGA CAAGGTGCGC GCCCAGGGCG ACTCCATCGG CTTCAACGCC
CTCACCGGCG GTTACGAGGA CCTGGTCGCC GCGGGCGTCA TCGACCCCGC CATGGTCACC
CGCTCGGCGC TGCAGAACGC GGCCTCCATC GCGGGCCTGC TGGTCACCAC CGACGTGGTG
GTCGCCGAGC CCGAGGAGGA GCAGCCCGCG ATGCCCGGCG GCGGCATGGG CGGCATGATG
TAA
 
Protein sequence
MAHKELKFNT EARQALERGV NKLADAVKVT LGPKGQYVVL DKKFGSPTIT NDGVTIAREI 
ELEDIFENQG AQLLKEVATK TNDVAGDGTT TATVLAQIIV REGLKNVAAG ANPVILRNGI
EKAVEKAVEA IREQAKEISG KDEIARVGAI SARSEEVGNV IAEAIDKVGK DGVVNVEEGQ
TLGIDLEFTE GMQFDKGYLS PYFVTDQDRM EAVLEDPYIL IANQKISNVQ DLLPLLNQVM
QANKPLLIIA EDVEGEALAT LIVNKLRGTF QSCAVKAPGF GDRRKRMMED IAILTGGEVI
TEELGLKLEN TQLSQLGRAR KVVVTKDDTT IVDGAGDPEQ IKGRINQIKA ELETTDSDFD
REKLQERLAK LAGGVAVIKV GAATETELKE KKHRVEDALS ATRAALEEGI VPGGGVALLK
AQKAVGELLD ELDGDERTGA RIVYRALEEP IRQIAENAGA DGSIVVDKVR AQGDSIGFNA
LTGGYEDLVA AGVIDPAMVT RSALQNAASI AGLLVTTDVV VAEPEEEQPA MPGGGMGGMM