| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0773 |
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| Symbol | |
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| ID | 4116909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 810033 |
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| End bp | 811637 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638035557 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_643553 |
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| Protein GI | 108803616 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.23887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGGCA GACAGACGAC CGCGGATGCC GGGGACCTCT TCCAGCGGCG GGCCACCGGG
CTCTTGCGCG GCTGGTCGGT GAGGGACGCC TTCATCTACG CCGCCTTCTC GATAAACCTC
ATAACGCTCG GGCTCTTCAT CTTCTCCTAC GGCCCCTTTA TCCCGGAGGG GTCGCTGGTC
ATGGCCGTGG TGCTCTCCGG GCTGTACCTG GTCTTCCAGG CCGTGACCTA CGCCTCGCTC
ATCGCGGTCA TGCCCCGGGC CGGCGGCGAC TACGTGTGGC AGAGCCGGGT TCTGAGCGGC
GGCATCGGGT TCGTGCTCTC GGTGACGGGG TGGTGGTTCA TCCTCTGGCA CTGGGTGCCC
ATCTACGCCA ACATCCTCAA CGTGCAGGTT CTGGTGCCGC TCTCCCGGAT CTTCGGCCTG
GAGGGCTCCG CGAGCTTCTT CAACGGCTCC GCCGGGCTCT TCGTCGCCTC GCTCGCCGTG
GCGCTGCTCG CCTCGCTGTA CATCTCGCTC GGGATGCGGG CCTACGCCAG GATCCAGAAG
TTCTGCTTCT ATGTGGGGGT GGCGGGGCTC GCCGTGATGC TCGTGCTGCT CCTCCTCCAC
TCCCGCTCCG ACTTCATCTC CGCCTTCAAC TCGCAGGCCA GCGAGGTCTT CGGGGCCTCC
GGCAACGCCT ACCGGCAGAC CATCGAGGCC GGGGCCGTCG GGCGCCCGGA GGTGGCCTTC
TACCCGACGC TGCTGCTGAT CCCCATGGTC GTCTTCTTCA ACCTGTGGTC CAACTGGGGG
GCCACCCTCT ACGGCGAGGT GCGCGGTGCC TCCGACTTCC GGAAGAACAT CTACGCCATG
GGCGGCGCGC TGCTCGCGAC CACCGTGGTC GCCGCGATCA TGCTGCTGCT GTTCGCCAAG
ACCTTCGGCT GGGACTTCTA CTACGCCGCC AACAACGCCT ACTGGTCCGG GGCCGAGAAC
GCCCCGATCC CCGACTGGCC CTACCCGGGG CTGTTTGCGG CCTTCTTCTT CGACAGCCCC
GTTCTGCAGG CGCTCCTCGT CGGGGTGCTC TCGCTGTGGT TCTTCGGGTG GTGCGGCACC
GTCTTCCTCT CCTCCACCCG GGTGGTCTTC GCCACCGCCT TCGACCGGGT GCTCCCCGAG
TGGGTCGCCA AGACCTCCAG GAACGGCGTC CCCTACGTGG CGCTGCTGCT CATGCTCATC
CCCTCCATCC CCATCAGCTA CCTGTACGCC TTCGGGGAGA ACTTCGCCAC CTACACCCTG
GACGCCACGC TGGTCATCGC GATGACCTTC TTCGGGTCCG CCGTGGCCGC GGCCGTCCTG
CCCTGGCGCA AGCCCGAGAT CTACAACGCC TCCCCCATAG CCCGCTACAC CCTCTTCGGG
GTGCCGCTCA TCACCGTGGC GGCCGTCGCC TTCGGGGTGT TTCTGGCCTT CTGCCTCTAC
CAGTGGGTCT TCCGCGACGT CTACGGGGTG AACAACCCGC AGTCCATGAT CTACATGCTC
GCCCTCTACG CGATCGCCAT AGCCATGTAC GTGGGCTTCA GGCTCCTGCG GCGGGCGCAG
GGGATGGACC TGAAGATGGT CTACGACGAG ATCCCGGAGG ACTAG
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| Protein sequence | MAGRQTTADA GDLFQRRATG LLRGWSVRDA FIYAAFSINL ITLGLFIFSY GPFIPEGSLV
MAVVLSGLYL VFQAVTYASL IAVMPRAGGD YVWQSRVLSG GIGFVLSVTG WWFILWHWVP
IYANILNVQV LVPLSRIFGL EGSASFFNGS AGLFVASLAV ALLASLYISL GMRAYARIQK
FCFYVGVAGL AVMLVLLLLH SRSDFISAFN SQASEVFGAS GNAYRQTIEA GAVGRPEVAF
YPTLLLIPMV VFFNLWSNWG ATLYGEVRGA SDFRKNIYAM GGALLATTVV AAIMLLLFAK
TFGWDFYYAA NNAYWSGAEN APIPDWPYPG LFAAFFFDSP VLQALLVGVL SLWFFGWCGT
VFLSSTRVVF ATAFDRVLPE WVAKTSRNGV PYVALLLMLI PSIPISYLYA FGENFATYTL
DATLVIAMTF FGSAVAAAVL PWRKPEIYNA SPIARYTLFG VPLITVAAVA FGVFLAFCLY
QWVFRDVYGV NNPQSMIYML ALYAIAIAMY VGFRLLRRAQ GMDLKMVYDE IPED
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