| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0772 |
|---|
| Symbol | |
|---|
| ID | 4116908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 809048 |
|---|
| End bp | 810013 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638035556 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_643552 |
|---|
| Protein GI | 108803615 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2129] Predicted phosphoesterases, related to the Icc protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.232287 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTTCT TCTCGCGCAA ACCGTCGGTG CGCGTCTTCT TCGCCACCGA CATCCACGGG
TCCGAGACCT GCTGGCGCAA GTTCCTGAAC GCCGCCGGCC ACTACCAGGC CGACGTGCTC
GTCCTGGGCG GGGACATGAC CGGCAAGGCG CTCGTCCCCG TGGTCCGGGA CGGGGGGCGC
TGGCGGGCCA CGCTGCTCGA GAACCGCTAC GAGTTCGAGG GCGAGGACGA GGTGGGGGAG
TTCGAGGAGG CCGTGCGGCG GCGCGGGTAC TACCCCTTCC GGACCACCCC AGAGGAGCTC
GCCGAGCTCG AGGCCGACGA GAAGAGGCGC GAGGAGCTCT TCCACAGAAA GATGCTCGGC
CGGATAGAGC GCTGGATGCG GATGGCCGAC GAGCGGCTCG ACGGGAGCGT CCGGTGCTTC
GTGTGCCCCG GCAACGACGA CCAGTTCGAG GTCGACGAGA TCGTGCGCTC TGCGCGGCGG
GTGGAGCTGG CCGAGGGCAG GGTCGTGGAG TTCGGGGACG GGTACCAGAT GATCTCCACC
GGCTGGTCCA ACCGCACCCC GTGGGACACC TACCGGGAGG ACGACGAGGA GGCCCTCGAG
GAGCGGCTGC GGCGCATGGC CGGGGCGCTC GGGGTGCCCC CCGAGCGGGC CGTCTACAAC
CTCCACTGTC CGCCCTACGG CTCCGGCCTC GACGAGGCGC CCGAGATAAC GGCCGACATG
CGCCCCAAGG ACGCCGGGCG CTCCACCGTG CCGGTGGGGT CCAAGGCCGT CCGGAAGGTC
ATAGAGGAGG GCCAGCCGGC GCTCTCGCTG CACGGCCACA TCCACGAGGC GCGGGGCAGC
GCCCGCATCG GGCGCACCCT GTGCATCAAC CCCGGAAGCT CCTACGAGCA GGGCCAGCTG
CTCGGGGCCG TGGTGGACCT CGACGGCGGC AGCAAGGTCA AGCGTTTCGT GCTCACCAGC
GGATAA
|
|---|
| Protein sequence | MRFFSRKPSV RVFFATDIHG SETCWRKFLN AAGHYQADVL VLGGDMTGKA LVPVVRDGGR
WRATLLENRY EFEGEDEVGE FEEAVRRRGY YPFRTTPEEL AELEADEKRR EELFHRKMLG
RIERWMRMAD ERLDGSVRCF VCPGNDDQFE VDEIVRSARR VELAEGRVVE FGDGYQMIST
GWSNRTPWDT YREDDEEALE ERLRRMAGAL GVPPERAVYN LHCPPYGSGL DEAPEITADM
RPKDAGRSTV PVGSKAVRKV IEEGQPALSL HGHIHEARGS ARIGRTLCIN PGSSYEQGQL
LGAVVDLDGG SKVKRFVLTS G
|
|---|
| |