| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0769 |
|---|
| Symbol | |
|---|
| ID | 4116905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 805439 |
|---|
| End bp | 806221 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638035553 |
|---|
| Product | IclR family transcriptional regulator |
|---|
| Protein accession | YP_643549 |
|---|
| Protein GI | 108803612 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0526753 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTGA TGGATGCTTT GAACCGCAAG AGCGGCTCCG TCCAGTCCGT GGACCGGGCC
ATAACCGTGC TCGAGTTTCT GGCGCGCAAC GGCTGGTCCG GGGTAACGGA GGTCGCCAAC
GAGCTGGGAA TACACAAGTC CACCGCCTAC CGGCTCCTCA CCACGCTCAG GGACCGGGGG
CTGGTCGAGC AGGACGCGGC GACGGAGAAG TACCGGCTCG GGTTCGGGCT GGTGCTCCTG
GCCCAGTCGG TCACGGCGGG GCTGGACATC CTGCGCTGCG CCCGTCCGGT GTGCGAGCGC
CTGAGCGAGC GGACGGGGGA GACCGTCACG GTCGCGGTGC TGGAGGATGA CGACGCGGTG
GTGATCCACC AGCAGATCTC CGACGCCTCC GCGCTGAGCG TGGACTGGAC CGGCCGGGCC
ACGCCGCTGC ACGCGACGGC GGCGGGCAAG ATCTTTTTGC TCCACATGCC GGAGGAGCAG
CGGCGGCGCC TGCTGAGCGA GCCGCTGCCG CGCTACACGC AGAACACGAT CGTGGAGCCC
GGGCGCCTGC TGGAGCACAT CCAGGAGATC CGGGAGACCG GCTACGCCTA CACGATCGAG
GAGCTGGAGG ACGGGCTGAA CGCCGTGGGA GCCCCGATCT ACGCCTCCGG CGGGGCGGTC
GCGGGGGCGG TGACGGTCTC GGGCCCCGCC TTCCGGATGC CCCCCGAGTC GGTGCCGAAG
GTGGGGCGGC TGGTGAAGGA GGCGGCGGCG GAGATCTCGC GCTGTCTGGG CTTCAAGGGC
TGA
|
|---|
| Protein sequence | MSLMDALNRK SGSVQSVDRA ITVLEFLARN GWSGVTEVAN ELGIHKSTAY RLLTTLRDRG
LVEQDAATEK YRLGFGLVLL AQSVTAGLDI LRCARPVCER LSERTGETVT VAVLEDDDAV
VIHQQISDAS ALSVDWTGRA TPLHATAAGK IFLLHMPEEQ RRRLLSEPLP RYTQNTIVEP
GRLLEHIQEI RETGYAYTIE ELEDGLNAVG APIYASGGAV AGAVTVSGPA FRMPPESVPK
VGRLVKEAAA EISRCLGFKG
|
|---|
| |