| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0716 |
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| Symbol | |
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| ID | 4116524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 748683 |
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| End bp | 750188 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 80% |
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| IMG OID | 638035501 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_643498 |
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| Protein GI | 108803561 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0241] Histidinol phosphatase and related phosphatases
[COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.358199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGCC CGGCGGTGGA CGTGGTGGTC CCCACCGCGG GGCGCCCCTC GCTCCGCGCC
CTCCTGGAGG CCCTCGCCCG GCAGCCGCCG CCGGGCCGGC TGCTGCTGGT GGACGACCGC
AGGAACCCCG GCGGCCCCCT GCTGCCCGAG GGCCCGCCGG CGGGGCTCGC CGGGAGGGTG
GAGGTGCTGC GCGGCCCCGC CCGCGGCCCC GCCGCGGCCC GCAACGCCGG CTGGCGGGCC
TCCGGGGCCG GGTGGGTGGC CTTCCTGGAC GACGACGTCG TCCCCGAACC CGGCTGGACC
CGGGATCTCC TGCGCGACCT CTCCGGGCTC GGCCCCCGGG TCGCCGCGAG CCAGGGGCAG
CTGCGCGTCC CCCTCCCCGC CGGGAGGAGG CCCACGGACG CCGAGAGGGG CGTCAAGGGG
CTCGAGACCG CCCGCTGGAT CACGGCCAAC ATCGCCTACC GGCGGGAGGT TCTGGAGCGC
CTCGGCGGCT TCGACGAGCG CTTCCCCCGC GCCTACCGGG AGGACGTGGA GCTCGGGCTG
CGGGCCGTGA GATCGGGGCT GCGCATCGTG GGCGGCGAGA GGACCGTGCT GCACCCCGCG
CGCCCGGCCG GCCCCCTCGA GAGCGTGCGC CGGCAGGCCG GGAACGCCGA CGACGCGCTG
ATGCTCCTGC TCCACGGGCG CGCCTGGCGG CGGGAGGCCG GGGTTCCTCC CGGACGCCGG
CCGCGGCACC TGCTCGTCAC CGCCGCCGGG GCCGCCGCGC TCGCCGCCCT GGCGGCCGGG
CGCCGCCGGG ACGCCGCGCT CGGGGCGCTC CTCTGGCTGC TCGGGACCAC CGAGTTCGCC
GCCTCCCGCA TCCTGCCCGG GCCCCGCACC CTCCCCGAGG TCTCCTCGCT GCTGCTGAGC
AGCGCGCTCA TCCCCCCGGC GGCCTCCGCC TGCTTCGCGC TCGGGCTGCT GCGCGCCCGC
CGGCTCGCCC CCGGCGGGGC ACGCCGCCTC CCGGAGGCCG TCCTCTTCGA CCGGGACGGC
ACCCTCGTGC ACGACGTGCC CTACAACGGC GACCCGGAGA AGGTGGTGCC CGTCCCCGGC
GCCCGGCGGG CGCTGCGGAG GCTCAGGGCG GCCGGCGTCC CCGCGGGCGT GATCTCCAAC
CAGAGCGGCG TCGGGCGCGG CCTGATCTCG GCGGAGCAGG TGGCGAGGGT CAACCGCCGG
GTGGAGGAGC TCCTCGGCCC CTTCGGGGCC TGGGCGCTCT GCTGCCACCG CCCGGAGGAC
GGCTGCGGAT GCCGCAAGCC CGCCCCCGGC CTCGTCCTGC GGGCGGCGGC GCAGCTCGGG
GCCGACCCCC GCCGCTGCGT CGTGATCGGC GACATCGGCG CGGACGTGGA GGCCGCCCGG
GCCGCCGGGG CCCGGGGCAT ACTCGTCCCC ACCCCCGCCA CTCGCCCGGA GGAGGTGGAG
GCCGCCCCCG AGGTCGCCCC GGACCTGGAG TCGGCCGTGG AGCTCGCGCT GGGGGGCGGC
GCGTGA
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| Protein sequence | MSRPAVDVVV PTAGRPSLRA LLEALARQPP PGRLLLVDDR RNPGGPLLPE GPPAGLAGRV
EVLRGPARGP AAARNAGWRA SGAGWVAFLD DDVVPEPGWT RDLLRDLSGL GPRVAASQGQ
LRVPLPAGRR PTDAERGVKG LETARWITAN IAYRREVLER LGGFDERFPR AYREDVELGL
RAVRSGLRIV GGERTVLHPA RPAGPLESVR RQAGNADDAL MLLLHGRAWR REAGVPPGRR
PRHLLVTAAG AAALAALAAG RRRDAALGAL LWLLGTTEFA ASRILPGPRT LPEVSSLLLS
SALIPPAASA CFALGLLRAR RLAPGGARRL PEAVLFDRDG TLVHDVPYNG DPEKVVPVPG
ARRALRRLRA AGVPAGVISN QSGVGRGLIS AEQVARVNRR VEELLGPFGA WALCCHRPED
GCGCRKPAPG LVLRAAAQLG ADPRRCVVIG DIGADVEAAR AAGARGILVP TPATRPEEVE
AAPEVAPDLE SAVELALGGG A
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