Gene Rxyl_0525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0525 
Symbol 
ID4116297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp555298 
End bp555828 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content71% 
IMG OID638035313 
ProductPadR family transcriptional regulator 
Protein accessionYP_643311 
Protein GI108803374 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00520723 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGAGGG CGCCGGGAGG GTTTTTCTGG CGGGGGTCTG GTTTTGGGCC GCGGCGGAGG 
TTTGGGAAGG GGGATCTGAA GTACGTGATC CTGGACCTCC TCGAGCGGGG GCCGGCCCAC
GGCTACCAGC TGATAAAGGC GCTCGAGGAG CGCTCTCGCG GGCTCTACGC CCCGAGCCCG
GGCTCCGTCT ACCCCACGCT GCAGATGCTC GAGGACATGG GGTACGTCGG GTCGTCCCGG
GAGGACGGCA AGAAGGTCTA CCAGATCACG GAGGAGGGGA GGGGCTTTCT GCGGGAGCGC
CGGCGGTCGC TCGAGGAGGT CTGGCGGCGC TTCGGGCGGG GCTGGGACCC CGGGCTCGAG
GGCGAGCTGC ACGAGATCCG GCACGAGCTC GCCCACCTCT GGAGGCTCTT CGGGCGGAAG
GCGCGCGCGG GGAGGGTGGA TCAGGAAAAG CTGCGCCGCG TCCGCGGGGT GGTAGTCGAG
GCCGCCCGGC GGATAGAGGA CATCCTCGAG GACAGGGACG CCCGCGCCTG A
 
Protein sequence
MVRAPGGFFW RGSGFGPRRR FGKGDLKYVI LDLLERGPAH GYQLIKALEE RSRGLYAPSP 
GSVYPTLQML EDMGYVGSSR EDGKKVYQIT EEGRGFLRER RRSLEEVWRR FGRGWDPGLE
GELHEIRHEL AHLWRLFGRK ARAGRVDQEK LRRVRGVVVE AARRIEDILE DRDARA