Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0395 |
Symbol | |
ID | 4117493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 423128 |
End bp | 424075 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638035184 |
Product | inner-membrane translocator |
Protein accession | YP_643182 |
Protein GI | 108803245 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.853202 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGCGCC CGCGGGTAGA CCCGGTCCTC ATAGCCCTGC TGCTCGCCGC CGGGCTCTTC GCCCTCGGCA GCCTCCTGCA GCCGGGCTTC GGCAGCTACG ACCAGGCGAT GAACATCCTG CGCCTCGCGG CCTTTCTGGG CATCGTCGCC GCCGGGCAGA CGCTGGTCAT CATAAGCGGC GGGGAGGGGA TAGACCTCTC CGTGGGGGCG GTGGTCACGC TGGGGGCCAT CCTGGTCTTC AGGCTCGGCA CCGGGGAGGC GGGCGGGGCG CTGCTGGCGC TCGCCATAGC GCTCGGCGTC GGGCTCCTCA TAGGCGCGGC GAACGGGCTC GGGATCACGC TGCTCAAGAT CCCCCCGCTG GTGATGACGC TGGGGATGGC CGGCGTGGTG CAGGGCCTGA TCCTGGTGGT AACCCGCGGC GAACTGCGCG GCGAGACGCC GGACCTCCTG GCCGGCCTGG TCTCCGGGTC GCTCGCCTTC GGGATCCCGG GGGTGGTCCT GGTGTGGGCG GCGCTGGGCC TGCTGATGTG GCTCTTGCTG TGGCGCACCC CCTACGGCAG GCAGCTCTTC GCCGTGGGGG CCAACCGCAC CACCGCCCGG CTCTCGGGGG TCAGGGTCCC CGCCGTGGTC GTGGCCACCT ACGCGCTGAG CGGGATGCTC GCCGCGCTGG GCGGGGCGAT CCTGCTCGGC TACACCCGGC AGGTCTTCCT CAACCTCGGC GACCCCTACA CCCTCCCCTC GGTGGCCGCC GTGGTGGTCG GGGGGACCCT GCTCGCGGGC GGCGTCGGCA GCTACGCGGG GACGATGGCC GGGGCGCTGG TCCTCACCCT CCTGACCAGC CTGCTCACCG CCCTCGACCT CCCCGAATCC GCCCGCCAGA TCGTCTACGG GCTGACCCTG CTCGCCCTGC TCTCCCTCTA CGGCAGGCAG CGAGCCCTGA GGGAGTGA
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Protein sequence | MKRPRVDPVL IALLLAAGLF ALGSLLQPGF GSYDQAMNIL RLAAFLGIVA AGQTLVIISG GEGIDLSVGA VVTLGAILVF RLGTGEAGGA LLALAIALGV GLLIGAANGL GITLLKIPPL VMTLGMAGVV QGLILVVTRG ELRGETPDLL AGLVSGSLAF GIPGVVLVWA ALGLLMWLLL WRTPYGRQLF AVGANRTTAR LSGVRVPAVV VATYALSGML AALGGAILLG YTRQVFLNLG DPYTLPSVAA VVVGGTLLAG GVGSYAGTMA GALVLTLLTS LLTALDLPES ARQIVYGLTL LALLSLYGRQ RALRE
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