| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0348 |
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| Symbol | |
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| ID | 4115071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 373796 |
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| End bp | 374773 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638035138 |
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| Product | pyruvate dehydrogenase (lipoamide) |
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| Protein accession | YP_643136 |
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| Protein GI | 108803199 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00569196 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGAGC GGGAGATGCC TGAGAGGGAG CGGTTGCTGG ACTTCTACGA GCGGATGGTG
CGCTGCATGC TCTGGGAGCA GAAGCTGCTG CGCTTTATCG ACGAGGGGAA GATCTCTGGC
TTCTACCATG CCGGGCGGGG CCAGGAAGGC ACCCAGGTGG GAGCGGTCGC CGCGCTCGGG
CCCGACGACT ACATGATGTA TGCCCATCGG GGCTGCGGCT ACATGGTGGC CCGGGGGATG
CCGATGTCCA AGCTCTTCGG CGACTTTCTG GCGAACACCG AGGGGTCTAC GAGGGGCTTG
GGGGCCGGCA TAGTGCACAT CGCCTGGCCC CAGCTCGGGA TTCTGGGGCA GAGCGGGACG
CTTGGCGGCT GTTTCCCGAT CGCCGCCGGG GCCGCGCTGT CGGCCAAGTA CCGGGGGACG
GACCAGGTGT GCCTCTGCTT CTTTGGCGAC GGCACCGCGA ACCGCGGGAC GTTCCACGAG
GCCGCCAACG CGGCCTCGGT CTGGAAGCTG CCCGTCATCT GGCTCTGCGA GAACAACCAG
TGGGCGGTCT CGGTCTCGGT CAGGGAGGCG ACCGCGGTAA AGCAGATAGC CGACCGGGCC
GGCGCCTACG GCATGCCGGG CGAGGTCGTG GACGGCCAGG ACGTCGTCGC CGTCTACGAG
GCGGTCTCCA GGGCCGTGGA GCGCGCCCGC CGCGGCGAGG GGCCGAGCCT CATAGAGGCC
ATGACCTACC GCTTCCGGGG GCACTACGAG GGGGATCCCG ACACCTACCG GGACAGGGAA
GAGGTCGAGC GCTGGAGAAA GGAGCGCGAC CCCATACTGC TTTTGGCCAA CCGGCTGCGG
TCCGAAGGGC TTGCGAGCGA GCAGGATCTC GAGCAGATCA GGGCCAGAGT CCAGCGGGAA
GTGGACGAGG CGGCGGAGGA GGCGCTCGGC GCTCCCATGC CGGAGCGCGA GCGGATCTTC
GAGTTCGTCA CCGCCTAG
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| Protein sequence | MEEREMPERE RLLDFYERMV RCMLWEQKLL RFIDEGKISG FYHAGRGQEG TQVGAVAALG
PDDYMMYAHR GCGYMVARGM PMSKLFGDFL ANTEGSTRGL GAGIVHIAWP QLGILGQSGT
LGGCFPIAAG AALSAKYRGT DQVCLCFFGD GTANRGTFHE AANAASVWKL PVIWLCENNQ
WAVSVSVREA TAVKQIADRA GAYGMPGEVV DGQDVVAVYE AVSRAVERAR RGEGPSLIEA
MTYRFRGHYE GDPDTYRDRE EVERWRKERD PILLLANRLR SEGLASEQDL EQIRARVQRE
VDEAAEEALG APMPERERIF EFVTA
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