| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0346 |
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| Symbol | |
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| ID | 4115069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 372049 |
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| End bp | 372819 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638035136 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_643134 |
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| Protein GI | 108803197 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0244456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCTTG AGGACAGGGT AGCGGTGATC ACCGGGGCGG CGAGCGGGCA GGGGCGGGCC
GCGGCGAAGC TGTTCGCCTC CGAAGGGGCA AAGGTCGTCG CAGCGGACAT AGACGAGGGC
GGGGCGCAGA GGACGGTCGA GGAGATAAAG GAGGCCGGCG GCGAGGCGAC CGCCGTAAAG
GTGGACGTGT CCCGCGAGCC CGACGTCAGG GCCATGGTAG AGAGTGCCAC AGACCGGTAC
GGGCGGCTCG ACGTCCTCTT CAACAACGCG GGCGTGGGCT ACTCGGCCTC GGGGCGCATG
AAGATGGCCA GCGTGGTCGA GACCCCCGAG AAAGACTGGG ACGCGATCCT CGCCATCAAC
CTCAAGGGCG TGGCGCTGGG CTGCAAGCAC GCCATCCCCG TCATGGAGCG GCAGGGCTAC
GGCTCGATCA TCAACAACGC CTCGATCAAC GCCCTGGTGG GGCTTCCCGG CGCGGACGCC
TACACGGCGG CAAAGGGAGG CGTGGTCGCG TTCTCCCGAG TTCTGGCCGT AGAGTGGGGT
CCCAGGGGGA TAAGGGTGAA CTGCATCTGC CCCGGCGGCG TCGACACGCC GATGATAGCC
CCGGTGATCT CGGACGAGCG GGTCATGCAG TCCATGAGGC AGAACACCCC CCTCGGGCGG
CTGGCCCGGC CGGAGGAGAT CGCCAGCGTA GCGCTGTTCC TCGCCTCGGA GGAGGCCTCC
TACCTCAACG GCGCAATCAT CCCCGTCGAC GGCGGCTGGA CCGCACACTG A
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| Protein sequence | MRLEDRVAVI TGAASGQGRA AAKLFASEGA KVVAADIDEG GAQRTVEEIK EAGGEATAVK
VDVSREPDVR AMVESATDRY GRLDVLFNNA GVGYSASGRM KMASVVETPE KDWDAILAIN
LKGVALGCKH AIPVMERQGY GSIINNASIN ALVGLPGADA YTAAKGGVVA FSRVLAVEWG
PRGIRVNCIC PGGVDTPMIA PVISDERVMQ SMRQNTPLGR LARPEEIASV ALFLASEEAS
YLNGAIIPVD GGWTAH
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