| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0305 |
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| Symbol | |
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| ID | 4114766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 316723 |
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| End bp | 318075 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638035094 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_643093 |
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| Protein GI | 108803156 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGCCCA CGAAGTTCGT TCTCGGCGAC GAGCACATCC CGCAGAGCTG GTACAACATC
GTGCCGGACC TGCCGTTCGC GCTGGAGCCG CCGCTCGACC CGGCCACCCG CGAGCCGGTG
GGTCCGGAGG CCTTCGCCCC GATCTTCCCG CGCGCCATCA TCGAGCAGGA GGTGAGCGCC
GAGCCGCGCG TCCCCATCCC GGAGGAGGTG CGAAAGATCT ACGGCCTCTG GCGGCCCACG
CCCCTCTTCC GCGCCCGGCG CCTCGAGAGG CTCCTCGACA CCCCCGCCCG CATCTACTAC
AAGTACGAGG GGGTCTCCCC CACCGGGAGC CACAAGCCCA ACACCGCCGT CCCCCAGGCC
TACTACAACC GCGAGGAGGG CGTCCGGCGC CTCACCACCG AGACCGGCGC GGGGCAGTGG
GGCTCCTCCC TCGCCTTCGC CTGCCGCCAG ATGGGCCTGG AGTGCACCGT CTACATGGTG
CGCGTCTCCT ACGACCAGAA GCCCTACCGC CGCATCATGA TGCAGACCTA CGGCGCGGAC
GTCCACGCGA GCCCCACGGA CCTCACGCAG GCGGGCCGCA GGATCCTCGA GGAGCACCCC
GACTCCCCCG GCTCGCTCGG GATAGCGATC TCCGAGGCCG TCGAGGACGC GGTCGGCAGC
GAGGACGCGA AGTATTCCTT GGGGAGCGTG CTCAACCACG TGCTCTTGCA CCAGACCGTG
ATCGGGCAGG AGGCCATAGA GCAGATGGAG CTCGCCGGCG AGTACCCGGA CGTGGTCGTC
GGCTGCGCGG GCGGCGGCTC CAACTTCGGC GGGATCGCCT TCCCCTTCCT GCGCGAGAAC
CTGCTGAACG GGAGGGACAC CCGCTTTATC GCCGTGGAGC CCGCCTCCTG CCCGACGCTC
ACCAAGGGCC GCTTCACCTA CGACTTCGGC GACACCGCGG GCACGACGCC CCTGATGAAG
ATGTACACGT TAGGCCACTC CTTCGTCCCG GCGGGGATAC ACGCCGGGGG GCTCCGCTAC
CACGGGGACT CCCCGATCCT GTCCGCGCTC GTGCACGAGG GGCTCGTGGA GGCGCGCGCC
TACCTGCAGA ACGAGACCTT CGAGGCCGGG GTGGCGTTCG CGCGGGCCGA GGGCATAGTC
CCCGCGCCGG AGGTCAACCA CGCCATAAAG GCGGTTATGG ACCTGGCGCT CGAGGCGAGG
GAGGCCGGGG AGGGGCGCGT GATCCTCTTC AACATGTGCG GCCACGGGCA CTTCGACCTC
TCGGCCTACG AGCGCTACCT GGCCGGGGAG CTCGTGGACC TGCAGCTCTC GCAGGAGGAG
ATAGACCGGG CGCTGGAGGG GCTTCCGATC TAG
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| Protein sequence | MEPTKFVLGD EHIPQSWYNI VPDLPFALEP PLDPATREPV GPEAFAPIFP RAIIEQEVSA
EPRVPIPEEV RKIYGLWRPT PLFRARRLER LLDTPARIYY KYEGVSPTGS HKPNTAVPQA
YYNREEGVRR LTTETGAGQW GSSLAFACRQ MGLECTVYMV RVSYDQKPYR RIMMQTYGAD
VHASPTDLTQ AGRRILEEHP DSPGSLGIAI SEAVEDAVGS EDAKYSLGSV LNHVLLHQTV
IGQEAIEQME LAGEYPDVVV GCAGGGSNFG GIAFPFLREN LLNGRDTRFI AVEPASCPTL
TKGRFTYDFG DTAGTTPLMK MYTLGHSFVP AGIHAGGLRY HGDSPILSAL VHEGLVEARA
YLQNETFEAG VAFARAEGIV PAPEVNHAIK AVMDLALEAR EAGEGRVILF NMCGHGHFDL
SAYERYLAGE LVDLQLSQEE IDRALEGLPI
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