Gene Rxyl_0266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0266 
Symbol 
ID4117756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp274071 
End bp274559 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content66% 
IMG OID638035056 
ProductCRISPR-associated exonuclease Cas4 family protein 
Protein accessionYP_643055 
Protein GI108803118 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCACCG GGACGCTCGT GTGGTACCAC GCGATCTGTC CGCGGCAGGC GTGGCTGATG 
GCACACCAGA TGGAGCCGGA GCGGGAGTTC GAGCTGCTCG CCGAGGGCCG GCTCAACCAA
CAGGAGCACT ACGAGCGCTC GATGAAGGAG CTCTCCCTGC CGGGGATGAG GCTCGACCGG
GTGAGGCGCG AGGGCGGGCG GATCATCGTC TCGGAGGTCA AGAAGTCCAC CAGATACCTT
CCCGCCGCGA GGCTCCAGCT CGGCTACTAC CTGCTGCGCC TCAGGGAGGA AGGGGTGGAG
GCGTCAGGTG AGATCCTGGT CCCCAAAGAG CGCTTCCGCG AGGGGGTCGA GCTCACACAG
GAACTCGAAG AGAGCGTAAG AGACGTGTTG GGAGAGCTGG AAGGGCTGCT CGAAAGGAGC
CTGCCTCCCC CGGCCGCCCG CATCCCCTAC TGCAGGAAGT GCGCATACGC GGAGTTCTGC
TGGTCCTAG
 
Protein sequence
MITGTLVWYH AICPRQAWLM AHQMEPEREF ELLAEGRLNQ QEHYERSMKE LSLPGMRLDR 
VRREGGRIIV SEVKKSTRYL PAARLQLGYY LLRLREEGVE ASGEILVPKE RFREGVELTQ
ELEESVRDVL GELEGLLERS LPPPAARIPY CRKCAYAEFC WS