Gene Rxyl_0253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0253 
Symbol 
ID4116084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp259502 
End bp259987 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content73% 
IMG OID638035043 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_643042 
Protein GI108803105 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGCGC GTGTGGGCGT GATCATGGGC AGCGCCTCGG ACTGGGAGAC GATGAGGCAT 
GCCTGCGAGG TGCTGGAGGA GCTGGGCGTC CCCCACGAGA AGCGGGTGGT CTCGGCGCAC 
CGGACGCCGG ATCTCATGTT CGAGTACGCC TCCGGCGCGG CGGAGAGGGG CATCGGGGTG 
ATCATCGCCG GCGCCGGCGG CGCGGCACAC CTGCCCGGGA TGGTGGCCTC CAAGACGGTG 
CTGCCGGTGA TCGGGGTGCC GGTGAAGTCC TCGAGCCTCA ACGGGCTGGA CTCCCTGCTC 
TCGATCGTGC AGATGCCGGG CGGGGTGCCG GTGGCCACGG TGGCCATCGG CCGGGCGGGG 
GCGACGAACG CCGGCCTGCT GGCGGCCCAG ATCCTCGCCG TTCGCGACCC GGAGCTCCGG 
CGCAGGCTCG AGGAGCGCCG CGAGCGGATG CGCCGGTCGG TCCTCGAGGG GGGCGACCTC 
TCGTGA
 
Protein sequence
MAARVGVIMG SASDWETMRH ACEVLEELGV PHEKRVVSAH RTPDLMFEYA SGAAERGIGV 
IIAGAGGAAH LPGMVASKTV LPVIGVPVKS SSLNGLDSLL SIVQMPGGVP VATVAIGRAG 
ATNAGLLAAQ ILAVRDPELR RRLEERRERM RRSVLEGGDL S