Gene Rxyl_0251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0251 
Symbol 
ID4116082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp256838 
End bp258289 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content75% 
IMG OID638035041 
Productamylomaltase 
Protein accessionYP_643040 
Protein GI108803103 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1640] 4-alpha-glucanotransferase 
TIGRFAM ID[TIGR00217] 4-alpha-glucanotransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGCTGG AGCGCTCGGC CGGGATCCTG CTCCACCCCA CCTCCCTGCC CGGACCCCGC 
CCCTCGGGGG AGCTGGGCCC GGAGGCGCTC CGGTTCGCGC GCTTTCTGCA GGGCGCGGGA
CAGCGGCTCT GGCAGGTGCT GCCCCTGAAC CCCACGGACG AGGGGGGCTC CCCCTACTCC
TCGTACTCGG CGTTCGCGGG CAACCCGCTG CTCGTGAGCG CGGAGTGGCT GGCGGAGGAC
GGCCTGATCG AGGGCGCGCC GCGCGAGGCC CCCGCCCCCC GGGTGGACTA CCGGCGGGCG
CTCGCCGCCA AGGGGCGCCT GCTGCGGGAG GCCTACTCCC GCTGGAGGCC CGACGAGGGC
TTCGAGCGCT TCCGCGAGGA GCGGTCCTTC TGGCTGGAGG ACTACGCCCT GTTCATGGCC
CTGCGGGGGC GACTCCGGCG CCCCTGGAAC CGCTGGCCCG CGGGCCTGGC CACCCGGGAG
CCGGGCGCCC TGCGCTCCGC CCGGCGGGAG CTGGCCGAAG AGGCTGGCTT CCACCGCTTC
ACCCAGTACC GCTTCTTCCG GGACTGGTCC AGGGTGCGGC GCGCCGCGCC CGGCGTGAGG
ATCATAGGGG ATCTGCCCAT CTTCGTCTCC CACGACTCGG CCGACGTGTG GGCCCACCGG
GATCTCTTTC TGCTGGACGA GAGGGGGGAG CCCGCCGCTG TGGCCGGCGT CCCCCCGGAC
TACTTCTCCG AGACCGGCCA GCTCTGGGGC AACCCGCTCT ACGACTGGGA GAGGATGCGC
CGGGAAGGGT ACCGCTGGTG GGTGGAGCGG GCGCGGGCGG CGCTGGCCCT GTGCGACGCG
CTGCGCCTGG ACCACTTCCG GGGCTTCGCG GCGTTCTGGG CGGTGCCCGC GGGGGAGCGC
ACCGCGGCCG GGGGCCGCTG GGTAGAGGGC CCGGGAGAGG GGCTCTTCCG GGTGCTCAGC
AAGGAGCTGG GCGGGCTGCC GTTCATCGCG GAGGATCTGG GCGAGATCAC GCCGGACGTC
GTGCGGCTGA GGGAGCGGCT CGGGCTTCCG GGGATGAAGG TGCTGCAGTT CGCCTTCGGG
AGCGGGCCGG AGAACCCCTT CCTCCCGCAC AACTGGCGGC AGGAGAGCTG GGTGGTCTAC
ACCGGCACCC ACGACAACGA CACCACCGCC GGCTGGTGGC TCTCCGCCGC GGACGGGGAG
CGGGCCTTCG CCCGGCGCTA CCTGGGGCGC GAGTACGCCG GGGTGTGGGA CTTCATCCGG
CTGGCCTACG CCTCGGCGGC GGGTTGGGCG GTGATCCCGA TGCAGGACGT CCTGGGCCTC
GGCACGGAGG CCCGGATGAA CACCCCGGGC ACCGGGGAGG GCAACTGGGA GTGGCGCCTC
GGCGGCGAGG CGCTGACCCC AAATCTGGCC GCGCGCCTCG GGGAGCTCGC GCGCACCTAC
GGGCGGGCCT AG
 
Protein sequence
MRLERSAGIL LHPTSLPGPR PSGELGPEAL RFARFLQGAG QRLWQVLPLN PTDEGGSPYS 
SYSAFAGNPL LVSAEWLAED GLIEGAPREA PAPRVDYRRA LAAKGRLLRE AYSRWRPDEG
FERFREERSF WLEDYALFMA LRGRLRRPWN RWPAGLATRE PGALRSARRE LAEEAGFHRF
TQYRFFRDWS RVRRAAPGVR IIGDLPIFVS HDSADVWAHR DLFLLDERGE PAAVAGVPPD
YFSETGQLWG NPLYDWERMR REGYRWWVER ARAALALCDA LRLDHFRGFA AFWAVPAGER
TAAGGRWVEG PGEGLFRVLS KELGGLPFIA EDLGEITPDV VRLRERLGLP GMKVLQFAFG
SGPENPFLPH NWRQESWVVY TGTHDNDTTA GWWLSAADGE RAFARRYLGR EYAGVWDFIR
LAYASAAGWA VIPMQDVLGL GTEARMNTPG TGEGNWEWRL GGEALTPNLA ARLGELARTY
GRA