Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0238 |
Symbol | |
ID | 4117728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 245063 |
End bp | 246490 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638035028 |
Product | amidase |
Protein accession | YP_643027 |
Protein GI | 108803090 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.190068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGGGG AGCTGTGCTT TCTGCCGGCC GTGGAGCTGG CCGGGCTCCT CCGGCGGCGG GAGCTCTCCG CCGCCGAGCT GATGGAGGCC CACCTCTCGC AGATAGAGCG CGTGAACCCC GAGGTGAACG CCATCGTCAC CCTCCTCCCC GAGCGGGCTA TGGAGGAGGC GCGCCGGGCC GACGCGGCGC TCGCCCGCGG GGAGGAGGTC GGCCCGCTGC ACGGTCTTCC GGTGGCCCAC AAAGACCTCT TCTGGACGAG GGGCGTGCGC ACCACCTTCG GCTCCCCCAT CTTCGCCGGC TTCGTCCCCG ACGCCGACGC CCTCATCGTG GAGCGGGCGC GGGGGGCGGG GGCCATCTCC GTGGGCAAGA CCAACACCCC CGAGTTCGGC GCCGGGTCCC AGACCTTCAA CGAGGTCTTC GGGGCCACCC TGAACCCCTA CGATACCTCC AGAACCTGCG GGGGCTCCAG CGGCGGGGCC GCCGTCGCTT TAGCCTGCGG GATGGTCCCC CTCGCCGACG GCTCGGACAT GGGCGGCAGC CTGCGCAACC CGGCGGCCTT CTGCAACGTG TTGGGCCTGC GGCCCTCGCC GGGGCGGGTC CCCTCCTGGC CCTCCCAGAC CTCCTGGTCC CCGCTCTCGG TGGACGGCCC GATGGCCCGC ACGGCGCGGG ACGCGGCGCT GATGCTCTCC GCGATAGCCG GGCCCGACCC GCGCTCGCCC ATCTCCCTCT CCGAGCCCCC CGGGCTTTTC GCCGCCCCCC TGGAGCGGGA CTTCTCCGGG GTGCGGGTGG CGTGGAGCCC GGACCTGGGG ACGCTGCCGG TGGAGGGGCG GGTGGCGGAG GTATTCCGGG GGAGCCTGCC CGTGCTGGAG GGGCTCGGCT GCGAGGTGGA GGAGGCCGCC CCGGACCTCT CCGGCGCCGA CGAGGTCTTC AAGGCGTTCA GGGCCTGGCA CTTCGAGCTG GCCTACGGGG AGCTGCTGGA GGAGCACCGG CAGAGGATGA AGGACACCGT GGTCTGGAAC ATCGAGGAGG GCCGCAGGCT GACCGGGCCG CAGCTCGGGG CGGCCGAGCG GAGGCGGACG GAGCTCTACC ACCGCGTGCT GGGGTTCATG CGGCGCTACG AGTTTTTGGT CCTCCCCACC ACGCAGGTGG CGCCCTTCCC GGTGGAGATG CCCTACGTGA CCGAGATAGA GGGCGCGAGG ATGGAGACCT ACATCGACTG GATGCGCTCC TGCTACTACA TCAGCGCGGT GGGGCTGCCC GCCGTCTCGG TCCCCTGCGG CTTTACGGGG GAGGGGCTTC CGGTGGGGCT CCAGATCGTG GGCCGCCCCC GCGACGACTT CGGGGTGCTG CAGCTCGCAC ACGCCTTCGA GGAGGCCACG GGATACGGGA GGCGCCGGCC GCCCGCGGCC GCCCGGCCCC TCAGGTGA
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Protein sequence | MSGELCFLPA VELAGLLRRR ELSAAELMEA HLSQIERVNP EVNAIVTLLP ERAMEEARRA DAALARGEEV GPLHGLPVAH KDLFWTRGVR TTFGSPIFAG FVPDADALIV ERARGAGAIS VGKTNTPEFG AGSQTFNEVF GATLNPYDTS RTCGGSSGGA AVALACGMVP LADGSDMGGS LRNPAAFCNV LGLRPSPGRV PSWPSQTSWS PLSVDGPMAR TARDAALMLS AIAGPDPRSP ISLSEPPGLF AAPLERDFSG VRVAWSPDLG TLPVEGRVAE VFRGSLPVLE GLGCEVEEAA PDLSGADEVF KAFRAWHFEL AYGELLEEHR QRMKDTVVWN IEEGRRLTGP QLGAAERRRT ELYHRVLGFM RRYEFLVLPT TQVAPFPVEM PYVTEIEGAR METYIDWMRS CYYISAVGLP AVSVPCGFTG EGLPVGLQIV GRPRDDFGVL QLAHAFEEAT GYGRRRPPAA ARPLR
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