| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0204 |
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| Symbol | |
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| ID | 4117831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 204839 |
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| End bp | 205720 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638034995 |
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| Product | 5-carboxymethyl-2-hydroxymuconate delta-isomerase |
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| Protein accession | YP_642994 |
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| Protein GI | 108803057 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.328291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTCG CCACGTATCT GGACGGCAGG CCGCGGGTGG GGGCGGTGGT CGACGGCGGG
GTCGTCGACC TGAGCGGGAG GTTCGGCTCC ATGCTGGAGC TCATCGAGGG GGGAGGGGAG
GCGCTGGAGG AGGCCCGCGC GGTCGCCGCG GGCTCCGGGC CCGCCGCCCG GCTCGACGAG
GTGAGGCTGC TGGCCCCCAT CCCGCAGCCC AGGAGGAACG TCTTCTGCAT GGGCTGGAAC
TACCTGACCC ACTTCGAGGA GGGGAGGGGA CGGCGCGAGG GGCAGGGGGA GGAGCTGCCC
GAGTACCCCA CCTTCTTCGA CAAGCCCACG ACCACCGTCA TCGGCCCCCA CGACGACATC
CCGTTCGACC CGAACTTCTC CGAGAAGATC GACTACGAGG CCGAGCTCGC CGTCGTCATA
GGCCGGTCCG GGAGGAGCAT ACCCGCCGGG GAGGCCATGG ACCACGTCTT CGGATACACC
GCCGCGAACG ACGTGACCGC CCGGGACGTG CAGCGGCGCC ACGGCGGCCA GTGGCTCAAG
GGCAAGGGGA TGGACGGAAG CTGCCCCTTG GGGCCCTGGA TCGTGACCGC CGACGAGATA
CCGGACGTGC AGAACCTGCA GGTCCAATGC CGCGTAAACG GCGTGCAGAA GCAGAACTCG
AACACCAGGT TCATGGTCTT CCCCGTCGCG AGGCTCATAG AGGAGCTCTC CCTGGCGATG
ACCCTCCTGC CCGGGGACGT CCTGCTCACC GGCACGCCGG AGGGCGTAGG CTACGCCCGG
ACGCCGCCCG AGTTCCTCAG GCCCGGCGAC GAGGTGACCG TCTACGTCGA GGGCGTCGGG
GAGATCTCCA ACCGCGTCGT CGAGAAAAAC CTCACCCGCT GA
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| Protein sequence | MKLATYLDGR PRVGAVVDGG VVDLSGRFGS MLELIEGGGE ALEEARAVAA GSGPAARLDE
VRLLAPIPQP RRNVFCMGWN YLTHFEEGRG RREGQGEELP EYPTFFDKPT TTVIGPHDDI
PFDPNFSEKI DYEAELAVVI GRSGRSIPAG EAMDHVFGYT AANDVTARDV QRRHGGQWLK
GKGMDGSCPL GPWIVTADEI PDVQNLQVQC RVNGVQKQNS NTRFMVFPVA RLIEELSLAM
TLLPGDVLLT GTPEGVGYAR TPPEFLRPGD EVTVYVEGVG EISNRVVEKN LTR
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