Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0196 |
Symbol | |
ID | 4117901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 198255 |
End bp | 199010 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638034987 |
Product | ABC transporter related |
Protein accession | YP_642986 |
Protein GI | 108803049 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCTGC TCTCGGTGGA GGGCCTCGGC AAGTCCTTCG ACGGTCTGCG GGTGCTCAGG GACGTCTCGT TCGCGGTGCA GCCGGGGCAG CGGCACGTCA TCATAGGCCC GAACGGCGCG GGGAAGACCA CCGTCTTCAA GTGCATAATC GGCCTCCTCT CCGCCGACTC CGGCTCCATA ACCGTCGACG GGCGGGACGT GACCGGGCTC CCCGCCCACG CCCGCGTCTC CCTCGGGATG GCCTGCACCT TCCAGAAGAC CAGCCTGTTC TGGAGGCTCA CGGTGGAGGA GAACCTCCAC CTGGCGCTTC TGGCCCGCAA GCCCTACCGG TTCCGGCTCT GGCGCCCGCT CCCCTGGCAC GCCGACCTGC GGCGGGAGGC GCGGGAGCTC CTGGAGGAGT GGGGGCTCTG GTCCCGGCGC GACCACCGGG TCGGCGAGCT CTCCTACGGG GAGCAGCGGA TGCTCGAGAT CGTCCTGGCG CTGGCCTCCG GGCCGCGGAT ACTGCTCCTC GACGAGCCGA CCTCGGGCAT GTCCCCGGCC GAGACGGCGC GCGCCGCCTC CCTGATACGC GAGCTGCCCC GCTCCGTGGC GCTCCTGATC ATCGAGCACG ACATGGACGT GGTCTTCTCC GTGGCCGAGC ACATAACGGT CTTGCACCAC GGCGAGGTCT TCCTGAGCGG GCCCCCGGAG CGGGTGCGCG GGGACGAGCG GGTGAGGGAG ATCTACTTCA GCGGAGGTGC GCGGCCCCAT GCTTGA
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Protein sequence | MSLLSVEGLG KSFDGLRVLR DVSFAVQPGQ RHVIIGPNGA GKTTVFKCII GLLSADSGSI TVDGRDVTGL PAHARVSLGM ACTFQKTSLF WRLTVEENLH LALLARKPYR FRLWRPLPWH ADLRREAREL LEEWGLWSRR DHRVGELSYG EQRMLEIVLA LASGPRILLL DEPTSGMSPA ETARAASLIR ELPRSVALLI IEHDMDVVFS VAEHITVLHH GEVFLSGPPE RVRGDERVRE IYFSGGARPH A
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