Gene Rxyl_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0196 
Symbol 
ID4117901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp198255 
End bp199010 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content71% 
IMG OID638034987 
ProductABC transporter related 
Protein accessionYP_642986 
Protein GI108803049 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCTGC TCTCGGTGGA GGGCCTCGGC AAGTCCTTCG ACGGTCTGCG GGTGCTCAGG 
GACGTCTCGT TCGCGGTGCA GCCGGGGCAG CGGCACGTCA TCATAGGCCC GAACGGCGCG
GGGAAGACCA CCGTCTTCAA GTGCATAATC GGCCTCCTCT CCGCCGACTC CGGCTCCATA
ACCGTCGACG GGCGGGACGT GACCGGGCTC CCCGCCCACG CCCGCGTCTC CCTCGGGATG
GCCTGCACCT TCCAGAAGAC CAGCCTGTTC TGGAGGCTCA CGGTGGAGGA GAACCTCCAC
CTGGCGCTTC TGGCCCGCAA GCCCTACCGG TTCCGGCTCT GGCGCCCGCT CCCCTGGCAC
GCCGACCTGC GGCGGGAGGC GCGGGAGCTC CTGGAGGAGT GGGGGCTCTG GTCCCGGCGC
GACCACCGGG TCGGCGAGCT CTCCTACGGG GAGCAGCGGA TGCTCGAGAT CGTCCTGGCG
CTGGCCTCCG GGCCGCGGAT ACTGCTCCTC GACGAGCCGA CCTCGGGCAT GTCCCCGGCC
GAGACGGCGC GCGCCGCCTC CCTGATACGC GAGCTGCCCC GCTCCGTGGC GCTCCTGATC
ATCGAGCACG ACATGGACGT GGTCTTCTCC GTGGCCGAGC ACATAACGGT CTTGCACCAC
GGCGAGGTCT TCCTGAGCGG GCCCCCGGAG CGGGTGCGCG GGGACGAGCG GGTGAGGGAG
ATCTACTTCA GCGGAGGTGC GCGGCCCCAT GCTTGA
 
Protein sequence
MSLLSVEGLG KSFDGLRVLR DVSFAVQPGQ RHVIIGPNGA GKTTVFKCII GLLSADSGSI 
TVDGRDVTGL PAHARVSLGM ACTFQKTSLF WRLTVEENLH LALLARKPYR FRLWRPLPWH
ADLRREAREL LEEWGLWSRR DHRVGELSYG EQRMLEIVLA LASGPRILLL DEPTSGMSPA
ETARAASLIR ELPRSVALLI IEHDMDVVFS VAEHITVLHH GEVFLSGPPE RVRGDERVRE
IYFSGGARPH A