Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0193 |
Symbol | |
ID | 4117898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 195115 |
End bp | 196359 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638034984 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_642983 |
Protein GI | 108803046 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.271143 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGAGCCA GCGATACGAT GCGCGGGAGG ATCGGCCGGC GCGACTTTCT GAGGCTCGCC GGGGGCGGGC TCGCCGGGAC GCTGCTGCTC GGGGTGGCCG GCTGCGGTGG CGGCGGGGGC GGCGGTCAGG GAGGGGGGAG CGGCCCCATC AGGATAGGGG CGCTGCTCAC GCTCTCCGGG CCGTACGCCA CGCTCGGCGA GAGCATCCGC AACGGCATGG AGACCTTCCT CCGGCTCAAC GACAACCAGA TCGGCGGCCG CGAGGTGCAG GTCCGCTACG AGGACAGCGA GGGCGACCCG CAGGTCGCGC TGCGCGTCTA CCGGCAGCTC ACCGGCCAGA ACGCCGTGGA CTTCCTCATG GGGCCGGTCA TCTCCACCGA GGCGCTCGCG CTCGCCAACC GGCTGCAGCG GGACAGGATC ATCCTCATCA ACTCCAACGC CGCGGCGAAC GATCTCTCGT GGGAGCAGAA GAGCGATTAC TCCTACAGGG TCTCCCAGTC CAACTACCAG CTCGGAGCGG CGGGGGCCGA GTACATCTTC CGGAACATAG GCAAGACCGC CTTCACCATC GGGATGGACT ACGTCGCCGG CTACGAGGTG ATAGAGGCCT TCAGGATCGC CTACCGGGAG GCCGGCGGGG AGGTCGTGGG CAGCGCCTTC TCGGCCCCCG GGACCGCGGA CTTCGCCACC TACCTCACCA ACATAAGGAG GGCCGAGCCC GAGGTGGTCT TCAGCTTCCT CTCGGGCACC GACGCCATAC GCTTTCTCCA GCAGTACGAC AGCTTCGGGC TGAAGGGCGA GATCCCGCTC ATAGGCCACG ACCAGCTGGC AAGCCCCACC GTCACCGACC CGGCCGGGGA GGCGGCGGTG GGCGTGATGG CGTGCTCTTT CTACTACCCC AACCTGGAGA ACGAGACCAA CCGGCGCTTC GTGGAGGCCT ACCGGAAGGA GTACGACCAG CCGCCCGACA CCATAGCCTG CCAGGGCTAC GACACCGGCA ACATAATGGC CAAGGCCGTG GAGGAGGCGG GCAGCACCGA GCCCGACGCC CTCATCGAGG TGCTCAAGGG CATCTCGCTC CAGAGCCCGC GCGGCTCCTT CACCATGGAC CCGGAGACCC ACAACCCCAT CCAGAACTAC TACATCGGGG AGAACGCGCG GGACGGCGTG CGGATAGTGG ACACCATAGA GGACGTGGGC ATGCCCTCCC GGCCGCCCGA GGGCTACGAC CCCTCCGGGG GCTAG
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Protein sequence | MGASDTMRGR IGRRDFLRLA GGGLAGTLLL GVAGCGGGGG GGQGGGSGPI RIGALLTLSG PYATLGESIR NGMETFLRLN DNQIGGREVQ VRYEDSEGDP QVALRVYRQL TGQNAVDFLM GPVISTEALA LANRLQRDRI ILINSNAAAN DLSWEQKSDY SYRVSQSNYQ LGAAGAEYIF RNIGKTAFTI GMDYVAGYEV IEAFRIAYRE AGGEVVGSAF SAPGTADFAT YLTNIRRAEP EVVFSFLSGT DAIRFLQQYD SFGLKGEIPL IGHDQLASPT VTDPAGEAAV GVMACSFYYP NLENETNRRF VEAYRKEYDQ PPDTIACQGY DTGNIMAKAV EEAGSTEPDA LIEVLKGISL QSPRGSFTMD PETHNPIQNY YIGENARDGV RIVDTIEDVG MPSRPPEGYD PSGG
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