| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0143 |
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| Symbol | |
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| ID | 4117790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 147289 |
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| End bp | 148863 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638034935 |
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| Product | SSS family solute/sodium (Na+) symporter |
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| Protein accession | YP_642934 |
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| Protein GI | 108802997 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACC GGGCGATAGC GACCATCTTC TTCGTCCTCA TCATAGTGCT CACCCTCGGG
ATAACCGCCT GGGCCGCCCG CCGCAACAAG GACACCGCCC ACCACTACGT CGCCGGCGGC
GAGATAAAGG GCTGGCAGAA CGGGCTCGCC ATCTCCGGCG ACTACCTCTC GGCGGCCAGC
TTTCTCGGGA TAGCCGGTTC GATCGCGTTG ACGGGGTTCT CCGGCTTCTA CCTCTCGATC
GGATTCCTGG TTGCTTATCT GGTGGTGCTG CTGCTCGTCG CCGAGCCCCT GAGGAACCTC
GGCAAGTACA CCTTCGCCGA CATGCTAGCG GCCCGCTTCA ACCTGCGCAG CGTCCGTTCG
GCGGCGGCGC TCTCCACCAT CGCCATAAGC ACCTTCTACA TGATCGCCCA GATGGTGGGC
GCTGGGGCGC TCATAGAGCT TCTGCTCGGG CTCCCCTACG TGGCCTCGGT CGTGATCATC
GGGGTGCTGA TGACCATCTA CATCGCGGCC GGGGGCATGG TGGCGACCAC CTGGATCCAG
ATCGTCAAGG CGGTCCTGCT GATCTCCGGA ACCCTTGCCC TGAGCATCGC CGTGCTCGCC
CAGTTCGGCT TCAACCCGGT GGCCATCTTC GACCGGGTAG AGGCAGAGCT GGGGCCGGAG
ATGGTCCTCC CGCCGCCCCC GGAGGGCTTC GTCTCCGGCA TAGACGTCGT CTCGCTCAAC
ATCGCGCTCG TCTTCGGCAC CGCCGGGCTG CCGCACATCC TCATGCGGTT CCTCACCGTC
CCGGACGCCA AGACGGCCCG CAACTCCATC ATCGTCGCCA CCTGGATCAT AGGGCTCTTC
TACCTGATGA CCCCGATCAT GGGCTACGGC GCGGCCCTGC TGGTGGGCCA GGACGTCATC
GCCGAGCAGA ACCCCGCCGG CAACACCGCG GCCCCGCAGC TCGCCGGAGA GCTCGGCGGC
CCCATCTTCC TGGCCTTTAT CTCGGCGGTG GCCTTCGCCA CCATCGTGGC GGTGGTGGCC
GGGCTCGTGA TCGCGGCCTC CAGCGCCTTC GCCCACGACT TCTACACCAA CGTCATCCGG
GGCGGCGAGG CGAGCGAGCA GGAGCAGTTC CGCGCGGCCC GCATCGCGGC CGTCGCCGTC
TCCCTGGGCG CGATGTTCCT CGCCATCTTC GCCCGCGACT TCAACGTCTC GTTCTTGGTC
GCCCTGGCCT TTGCGGTCGC CGCCAGCGCC AACGTTCCGA CCATCCTGTT CACGATCTTC
TGGCGCAGGT TCAACACGGC GGGCGCCATC GCGGGCATCC TCACGGGGCT GTTCTCGTGC
ATCGTCCTGA TCATTCTCAG CCCCAACATC CTCGACGTCT TCCCGCTGGC CAACCCGGCG
ATCATCTCCA TGCCGCTGGG CTTCGCCGCC TGCTACCTGG GCACGATCCT CACCGGCGAG
GCCGCGGAGC GCGAGATGGC CGAGGGCAAG CAGATCTCCT ACGACGAGAT CTACGTCCGC
GCCAACACCG GCATAACCCG CGTGGAGGAG GAGCTGCGCG AGGCCGCAGC GGCCGAGGAG
CCGCGGACCA CCTAG
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| Protein sequence | MSDRAIATIF FVLIIVLTLG ITAWAARRNK DTAHHYVAGG EIKGWQNGLA ISGDYLSAAS
FLGIAGSIAL TGFSGFYLSI GFLVAYLVVL LLVAEPLRNL GKYTFADMLA ARFNLRSVRS
AAALSTIAIS TFYMIAQMVG AGALIELLLG LPYVASVVII GVLMTIYIAA GGMVATTWIQ
IVKAVLLISG TLALSIAVLA QFGFNPVAIF DRVEAELGPE MVLPPPPEGF VSGIDVVSLN
IALVFGTAGL PHILMRFLTV PDAKTARNSI IVATWIIGLF YLMTPIMGYG AALLVGQDVI
AEQNPAGNTA APQLAGELGG PIFLAFISAV AFATIVAVVA GLVIAASSAF AHDFYTNVIR
GGEASEQEQF RAARIAAVAV SLGAMFLAIF ARDFNVSFLV ALAFAVAASA NVPTILFTIF
WRRFNTAGAI AGILTGLFSC IVLIILSPNI LDVFPLANPA IISMPLGFAA CYLGTILTGE
AAEREMAEGK QISYDEIYVR ANTGITRVEE ELREAAAAEE PRTT
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