Gene Rxyl_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0079 
Symbol 
ID4117923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp82982 
End bp83638 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content79% 
IMG OID638034873 
Product2-keto-3-deoxy-phosphogluconate aldolase 
Protein accessionYP_642872 
Protein GI108802935 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.493007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGGCG GGGGAGCGCT GGAGCGGCTC GGGCGGCTCG GGCTGGTGGC GGTGGTGCGC 
GGCCGCTCGT GGGAGGACGC GGTAGAGGTC TCGGAGGCCC TCGCGGAGGG CGGGGTGGCC 
GCCATCGAGG TGGCCTACAC CACCCCCGGG GCTGGACGGG CCATCCGCGA GCTGGCCCGG 
CGGCGCGGGG ATGGAATCCT GCTGGGGGCG GGGACCCTGA CCTCGCCGGG GCAGGCGGAG 
GAGGCCGCGG AGAGCGGCGC CTCCTTTCTG GTGAGCCCCG GCTTCGACCC CGGCCTGGTG 
TCGGCCATGC TCCGGACGGG GCGCGCCGCG CTGCCCGGCG TGCTCACCCC CGGCGAGGTG 
ATGGGGGCGC TGAGGCTGGG GGTGGGGGCG CTCAAGCTCT TCCCCGCCGG GGCGGTGGGC 
CCCGGGTACC TGAGGGCCCT GCTCGGCCCC TTCCCCGGGG TGCGCTTTGT GCCGACCGGG 
GGCGTCTCCG AACGCAACGC GGGCGAGTGG TTCGGGGCCG GGGCGTTCGC CGTGGGGGCG 
GGGGGAGCGC TCGCCCCGCC CCGCCTGCGG GACGGGAGGC ACCGGGAGGA GGTCGTCGGG 
CTCGCGCGCC GGTTCGCCGC GGCCGTGGAG CGGGCCCGGG AGGGCGCGCG CCGGTGA
 
Protein sequence
MDGGGALERL GRLGLVAVVR GRSWEDAVEV SEALAEGGVA AIEVAYTTPG AGRAIRELAR 
RRGDGILLGA GTLTSPGQAE EAAESGASFL VSPGFDPGLV SAMLRTGRAA LPGVLTPGEV 
MGALRLGVGA LKLFPAGAVG PGYLRALLGP FPGVRFVPTG GVSERNAGEW FGAGAFAVGA 
GGALAPPRLR DGRHREEVVG LARRFAAAVE RAREGARR