Gene Rxyl_0061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0061 
Symbol 
ID4117750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp62882 
End bp64033 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content69% 
IMG OID638034855 
Producthypothetical protein 
Protein accessionYP_642854 
Protein GI108802917 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCATCT GGCGCTGGTC CGGGAGAAAG AAGGAGGGAG CGCGCCGCGC CCCCGCCGCC 
TCCGGGGGGC GCCGCGCCCC CACCCCCATC TACGTCTCGC GGAGGACGTT CACCGCCCTG
GTGGCGCTCG CGCTGCTCTC CTTGGGCGTC GTCCTGTACC TCGCCCCGAT CATCTTCGAG
ATCCTCTTCG GCGGCATAGC GCTCGCCCTC GTGCTCTCCT ACCCGGTGCG GGCGCTCTCG
CAGGTGATGC CGCGGGAGCT GGCCATCCTG GTCACCGTGC TGGGGCTCTT CGGGCTGGTG
GCCCTGGCGC TGCTGTTCCT GATCCCGCTG CTCATAGAGC AGCTCACGAA CTTCGTGCGG
ATCACGCCGG CCATAGCCGC GAGCGCCACG GAGTTCTTCG GCTCGCTGGA CGACCTGCTG
AACCGGCGGG ACCTGCCGCT GCAGCTGCCG GAGAGCTTCG TCTCGGATCT GGTGCGGGAC
CTCTTCGACC GGGCCCAGCA GATCCTGGAG GGCATGATCC GGAACCTGAT CGGGTTCATC
TCCGGGGCGT TCAGCTTTGC GGTGGGGGTG CTCGGCGTGC TCTTCGTGGC GATCTACCTG
CTCATAGACG TGCGGAAGGT CAAGGCCGCG TACCTGCGGA TGGTCCCGCA CCGCTACCGC
TGGGACGCCC GCGAGCTGTG GGACGCCTTC GGGGTCTCGC TCTCGCGCTA CCTGGGCGGG
CTGCTCTTCG TGGTGGCGGT GCAGGGGGCC CTCTCGGCGG CGGCGCTCTG GGTGCTGGGG
GTGCCCTACC CGATCCTGCT CGGCGCCTGG GTCTCGGTGA CGGCCATAGT CCCCTACCTG
GGGCCGTTTC TGGGGGCCAT CCCGGCGATC ATCGTGGCCC TGATCTTCAC CACCCCCACC
ACGGCGGTGC TGACGGTGAT CGCCTACATC GCGATCCAGC AGTTCGAGGG GAACTTCCTG
ACGCCGAGGA TCCAGGGCCG CGCGCTGCAG GTGCACCCGA TCATCGTGCT GCTGGCGGTG
ATCGGGGGCG GCCAGATCGC CGGCATCGTG GGCATCCTGT TCGCCGTGCC GGTGCTGGCG
ATCCTGCGGG TCTTCGTGGA CTTTTTCCGG GTCCGGCTGC GGGTCGGCCC TCCCCCGCGA
AACGCCGCCT AG
 
Protein sequence
MGIWRWSGRK KEGARRAPAA SGGRRAPTPI YVSRRTFTAL VALALLSLGV VLYLAPIIFE 
ILFGGIALAL VLSYPVRALS QVMPRELAIL VTVLGLFGLV ALALLFLIPL LIEQLTNFVR
ITPAIAASAT EFFGSLDDLL NRRDLPLQLP ESFVSDLVRD LFDRAQQILE GMIRNLIGFI
SGAFSFAVGV LGVLFVAIYL LIDVRKVKAA YLRMVPHRYR WDARELWDAF GVSLSRYLGG
LLFVVAVQGA LSAAALWVLG VPYPILLGAW VSVTAIVPYL GPFLGAIPAI IVALIFTTPT
TAVLTVIAYI AIQQFEGNFL TPRIQGRALQ VHPIIVLLAV IGGGQIAGIV GILFAVPVLA
ILRVFVDFFR VRLRVGPPPR NAA