Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0060 |
Symbol | |
ID | 4117749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 61914 |
End bp | 62852 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638034854 |
Product | ABC transporter related |
Protein accession | YP_642853 |
Protein GI | 108802916 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATCGAGG CGGAGGGGCT GGGCATGAGC TTCGGCGGCG AGGAGGTGCT CGGGGAGATC TACCTGTCCG TGGGGGAGGG GGAGATCTTC GGGCTCATCG GACCCTCGGG GGCGGGGAAG AGCACCCTGA CCCGCCTGCT CACCGGCTAC CTCAGGCCCT CCCGGGGGAG CGTGCGGGTC TTCGGGCGGG ACCCCTGCGC CTTCGGCGCG GCGGACCGCC GCAGGATCGG CTTTATGCCC CAGGGGTTCG TGCTGTACGG GGGGCTCTCC GTGCGGCAGA ACGTGAACTT CGCCGCCGGG CTCTACGGGC TGCGGCTGGG AGAAAGAAGG CGTCGGGTGC GCGAGGTGCT GGAGTTCACC GAGCTGTGGA AGGACCGGCG CAAGGCGGCC TCCAGGCTCT CCGGGGGGAT GCAGCGGCGG CTGCAGCTCG CCGCCGCGCT GGTGCACGAG CCGCAGCTGC TGTTCGTGGA CGAGCCGACG GCCAACCTGG ACCCGATCCT CCGCCGCAAG TTCTGGGAGG GCTTCGAGGT GCTGCGCGAC ATGGGGCGCA CGATCTTCGT CACCACCCAG TACGTGGGCG AGGCGGAGCT GTGCGACCGG GTGGGCCTGC TCTCGGGCGG CGGCCTCGCC GCGGTCGGCA CCCCGGAGGA GCTGCGCCGG CGGGCGTTCG GCGGCGAGGC GATGGAGCTG ACGCTCGCGG GCGAACCCGG CAGGCTCGGC CGGCACCTGG ACGCCCTCGA GGGGGTGGGG CACGTGGTCG AGGTGCGGGA GGAGAGGCCC GGGGACGGCG CGGCGGCGAG CACCGTGCGG CTGGTGGTGG AGGACGCCGA CACCGCCCTG CCCCGCGCCT TCGAGGCCCT GCGCGGGGCC GAGGTGCTGT CCGCGGACCT CATCCACCCC TCCTTCGACG AGGTCTTTGT GCGGCTGGTG CGCGGCTAG
|
Protein sequence | MIEAEGLGMS FGGEEVLGEI YLSVGEGEIF GLIGPSGAGK STLTRLLTGY LRPSRGSVRV FGRDPCAFGA ADRRRIGFMP QGFVLYGGLS VRQNVNFAAG LYGLRLGERR RRVREVLEFT ELWKDRRKAA SRLSGGMQRR LQLAAALVHE PQLLFVDEPT ANLDPILRRK FWEGFEVLRD MGRTIFVTTQ YVGEAELCDR VGLLSGGGLA AVGTPEELRR RAFGGEAMEL TLAGEPGRLG RHLDALEGVG HVVEVREERP GDGAAASTVR LVVEDADTAL PRAFEALRGA EVLSADLIHP SFDEVFVRLV RG
|
| |