Gene Rsph17029_4119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_4119 
Symbol 
ID4894970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009040 
Strand
Start bp61892 
End bp62389 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content70% 
IMG OID640110517 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001041829 
Protein GI126464853 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones139 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones121 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGTCCG AACACCTCCT TCAGCTCTAC GTCTCGGAAC GCGAGCGGAT GGAGCGGCAG 
ATCGCCCGCC GGATCGGCTG CGCGAGCCTC GCGCGTGACA TCGTCCATGA CATCTTCCTG
CGTCTGTGGG AGCGTGCCAC GCGGCTGAAC GGGGAGCCTG CGGCCTATCT CAGTCGCTGC
GCGCGCAACG CGGCCGTCGA TCACCTGCGC GCGGAGCAGG CCCGGGCGCG GCTGCTGGCC
GAGGCCGCCC GACGCGACGA GGGTCTGCAT GCGCCCTCGG CGGAAGACGC GATGGGCGCC
CGCGACGCGC TGCAGCGGAT AGATCTGGCT CTGCTCGCCC TGCCGGAGAA GACCCGGCAC
ATCTTCCTGC TCAACCGCGT CCATGGCCGC AGCTTTTCCG AAATCGCCGG AGCTTTCGGC
ATGTCGGAGC GCGCGGTGGC CAAGCACATG GCCAAGGCCG TCGCCGCCTG CGCCGCCGCC
GCAGAGGTCG GGGCTTGA
 
Protein sequence
MQSEHLLQLY VSERERMERQ IARRIGCASL ARDIVHDIFL RLWERATRLN GEPAAYLSRC 
ARNAAVDHLR AEQARARLLA EAARRDEGLH APSAEDAMGA RDALQRIDLA LLALPEKTRH
IFLLNRVHGR SFSEIAGAFG MSERAVAKHM AKAVAACAAA AEVGA