Gene Rsph17029_4077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_4077 
Symbol 
ID4894971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009040 
Strand
Start bp14892 
End bp15743 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content73% 
IMG OID640110479 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_001041791 
Protein GI126464815 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones99 
Plasmid unclonability p-value0.362561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value0.125461 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTCG TCTTCGGCCG CACCGGGCAG GTGGCGCGCG AACTGGCGCG GCAGGCTCCG 
GACGCCCGCT TCCTCGGCCG CGACGAGGCG GATCTCGCCG ATCCCGAGGC CTGTGCCCGC
GCGATCCGCG AGGCGAAGCC TGACGCGGCG ATCAATGCCG CCGCCTGGAC CGCCGTCGAC
CGGGCCGAGG AGGAGGAGGC CCCGGCCACA GTGGTGAACG GGGAGGCCCC CGGCGCCATG
GCGCGGGCCT GCGCCGCATT GGGCATCCCC TTCGTGCAGA TCTCGACCGA CTATGTGTTC
GACGGCTCGG GCACCCGCCC CTGGCAGCCC GGCGATCCGG TGGGCCCGCT CGGCGCCTAT
GGCCGCTCGA AGCTCGCGGG CGAAGAGGCG GTGCGCGCGG CCGGCGGACC CCATGCGATC
CTGCGCACCT CCTGGGTCTT CTCGGCCCAT GGCGCGAATT TCGTGAAGAC CATGCTGCGC
CTCGGGGCCA CGCGCGACCG GCTCACCGTC GTCTGCGATC AGGTGGGCGG GCCCACACCC
GCGGCCGACA TCGCCGCGGC CTGCCTCGCG ATGGCGCGCG GCCTTGCCGC CCGGCCCGAT
CTGTCGGGCA CCTACCATCT CTCGGGCGGC CCGGACGTGA GCTGGGCCGA CTTCGCCCGC
GAGATCTTCC GTCAGGCGGA GCTCGACTGC CTCGTGGCCG ACATCGCGTC CGCGGACTAT
CCGCAGAAGG CCCACCGGCC GGCCAATTCC CGGATGGACT GTTCCGATCT CGCCCGCTTC
GGCCTCACCC GCCCCGACTG GCGGCAGGGC CTCGCCCGTG TTCTCGCCGA TCTCCAGGAG
GTTTCCGAAT GA
 
Protein sequence
MILVFGRTGQ VARELARQAP DARFLGRDEA DLADPEACAR AIREAKPDAA INAAAWTAVD 
RAEEEEAPAT VVNGEAPGAM ARACAALGIP FVQISTDYVF DGSGTRPWQP GDPVGPLGAY
GRSKLAGEEA VRAAGGPHAI LRTSWVFSAH GANFVKTMLR LGATRDRLTV VCDQVGGPTP
AADIAAACLA MARGLAARPD LSGTYHLSGG PDVSWADFAR EIFRQAELDC LVADIASADY
PQKAHRPANS RMDCSDLARF GLTRPDWRQG LARVLADLQE VSE