| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_4070 |
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| Symbol | |
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| ID | 4895059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009040 |
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| Strand | + |
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| Start bp | 6898 |
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| End bp | 9072 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640110472 |
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| Product | ABC transporter related |
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| Protein accession | YP_001041784 |
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| Protein GI | 126464808 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.00000105324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 83 |
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| Fosmid unclonability p-value | 0.180346 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCCT TCGATTCCCA GCTTCCCGGG TCCATCGCGC TCGACACGCC CGTGCTGTCG
ACGCTGCGCG CGGTGTTTCT GGTGGCGGCC CATCACGGGG TGCTGCTCGG CCCCGACGAG
CTGCCCCCGC TCGAGACCGG CGATTTCGCG CCCGATCTGC TGCGGCTTCT GGGCGGCAAG
GGGCTGCGCT GCCGGCTGCT GGCCGATGCG GGCTGGCGCA CCGCCTCGCG GCTCGGGCAG
GCCTATCCCG CGCTGGCGGA GCTGCGGGGC GGGCACTGGG CGGTGCTGGT CCATGCGGGC
GGGGCCGAGG GCGCGCGGAC CGTGGCCCTC CTCGATCCGC GGAACGAGGC CCAGGGGGTG
CAGGCCCTGC CCTGGGAGGA CTTCGCCCGG GACTGGACCG GCCGGCTGAT CCTGATCGGG
CGCCCCGACC GGCCGAGGGC CGCCGAGACC GCCTTCGGGC TGCGCTGGTT CCTGCCCGCG
CTCGCGCGCG AGAAGGGGCT CTTTCTCGGC GTCGCGGTGG CGGTGGTGAT CGGCAACCTG
ATCTCCTACG CGCTGCCCCT CCTCATGCAG GCGATGATCG ACCGGGTGAT CGCCTACCGG
GCCTGGAACA CGCTCGCCGC GGTCGCCGCG GTCTTCGTGC TGCTGGCGCT GTTCGACGCG
GGTTTCGGCT ATGTCCGCCA GCGGCTGAGC CAGATCGCGG GCGGCCGGAT CGACGCCCAT
CTGGGAGCCG AGAGCGTGGC CCATCTGCTC TCGCTGCCCA TGACGCTGTT CGAGACCACG
CCCGCGGGCG TGCTCGCGCG CAACATCCAG CAGACCGACA GGATCCGCCA GTTCCTGACC
GGGCGGCTGC TGCAGACCCT GCTCGACGCG GCCCTCCTGC CCGTGCTCTT CGCCACGCTG
GCCTTCCTGT CGGGACGGCT CGCGCTGGTG ATCGCGGCCT ACGGGATCGC CATCGCGGCC
TGCATCGCCC TCATGCTGCC GCTCCTCCAG CGGCGGCTGA ACGCGGTCTA TGCGGTCGAG
GCCGAGCGGC AGGCCCTTCT GGTCGAGACG CTGCACAACA TGCGCGCGGT GAAATCGCTC
GCGGTCGAGC CCGCCCGCGG CGCGCTCTGG GAGGAGAGCC TCGCCCTCTC GGTGCGCAGG
CAGTGGGATC TGGGCCGCGT CTCGGCCGTC ACGAGCACGC TCACCAGCCT GCTCGAGCGG
CTGATGCAGG TGAGCGTGGT GGCCTTCGGC GTGGCCCTGG CGCTCGAGGG CGCGATCACG
GTGGGCACGC TCGTGGCGGT GCTGATGCTG GCCGGGCGGG TCAGCGGGCC GCTCGTCCAG
ATCGTGGGGC TCGTCAACGA ATGGCAGGAG GCCGCCCTGT CGATCGGGAT GCTGCGCCGG
ATCATGGATC ATCCGCCCGA ACGGCCCGAC ACCGCCGCCC TCGCCCGCCC CGCCCTCACC
GGCGCGCTCG AGATCCGGGG GGTGAGCTTC GCCTATCCCG GCGCCGCCAC GCCCGCGCTC
GATCAGGTGA GCCTCGCCAT CGAGCCCGGG CAGGTGATCG GCATCGTCGG GCGCTCGGGC
TCGGGCAAGA CCACGCTCAC CCGGCTCATC CAGGGCATCG AGACCCCGCA GGCCGGGCTG
ATCCTGTTCG ACGGGATCGA CATCCGCAGC ATCGCGCTCG GCCCCCTGCG GCGGCAGGTG
GGGATCGTGC TGCAGGACAA TCTGCTCTTC CGCGGCACGC TGCGCGAGAA TATCGCCCTC
GCCCGCCCCG AGGCCGGGCT CGAGGCGGTG GTGCGCGCGG CCACCCTCGC GGGGGCCGAC
GAATTCATCC GCCGCCTGCC GCGGGGCTTC GACACGCCCG TCGAGGAGGG GGGCGCGAAC
CTCTCGGGCG GCCAGCGCCA GCGGGTGGCG ATCGCGCGCG CGCTGCTCAC CGATCCGCGC
ATCCTGATCC TCGACGAGGC CACGAGCGCG CTCGACCCCG AGTCCGAGGC GGTGGTCAAC
CGCAACCTCG CCGCCATCGC CCGCGGCCGG ACCATGATCG TGGTCTCGCA CCGGCTCTCG
TCCCTCGTGC GCGCCGACCG GATCGCGGTG CTCGATCAGG GCCGGCTCGT GGCCTTCGCC
CCGCACGAGG CGCTGCTCGC GGGCTGCGAG ATCTATGCCC ATCTCTGGCG CCAGCAGACC
GAGCATCTGT CATGA
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| Protein sequence | MAAFDSQLPG SIALDTPVLS TLRAVFLVAA HHGVLLGPDE LPPLETGDFA PDLLRLLGGK
GLRCRLLADA GWRTASRLGQ AYPALAELRG GHWAVLVHAG GAEGARTVAL LDPRNEAQGV
QALPWEDFAR DWTGRLILIG RPDRPRAAET AFGLRWFLPA LAREKGLFLG VAVAVVIGNL
ISYALPLLMQ AMIDRVIAYR AWNTLAAVAA VFVLLALFDA GFGYVRQRLS QIAGGRIDAH
LGAESVAHLL SLPMTLFETT PAGVLARNIQ QTDRIRQFLT GRLLQTLLDA ALLPVLFATL
AFLSGRLALV IAAYGIAIAA CIALMLPLLQ RRLNAVYAVE AERQALLVET LHNMRAVKSL
AVEPARGALW EESLALSVRR QWDLGRVSAV TSTLTSLLER LMQVSVVAFG VALALEGAIT
VGTLVAVLML AGRVSGPLVQ IVGLVNEWQE AALSIGMLRR IMDHPPERPD TAALARPALT
GALEIRGVSF AYPGAATPAL DQVSLAIEPG QVIGIVGRSG SGKTTLTRLI QGIETPQAGL
ILFDGIDIRS IALGPLRRQV GIVLQDNLLF RGTLRENIAL ARPEAGLEAV VRAATLAGAD
EFIRRLPRGF DTPVEEGGAN LSGGQRQRVA IARALLTDPR ILILDEATSA LDPESEAVVN
RNLAAIARGR TMIVVSHRLS SLVRADRIAV LDQGRLVAFA PHEALLAGCE IYAHLWRQQT
EHLS
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