| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_4069 |
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| Symbol | |
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| ID | 4895024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009040 |
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| Strand | + |
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| Start bp | 5009 |
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| End bp | 6781 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640110471 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001041783 |
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| Protein GI | 126464807 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 0.00017793 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 89 |
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| Fosmid unclonability p-value | 0.44147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTGC AGCCCGCCCC GATCCTGCCC ATCGGCTCCG TCTCTCCCCC GCTCACGGCC
GAGCAGCTGG TGGGTCTGGC CGAGGCCGCC CCCGCCGCGG CGATCGAGAT CTACCGCCGC
TGGCTCGCGC TCCATCCCGA GCGGCCCGAC GCCTGGATCG CCTGGTTCAA TCTCGCGGTG
CTGCTCGAGG CGGCGGGCGA GCCGCAGGGG GCGCTCGGCG CGGCCGCCAC CGCGCTCCGC
CAGAAGCCGG ACCTGTGGCA GGCGGCCCTC GCGGCGGGTC AGGCGGCCGA GGCGCAGGGC
GACCGGACGC AGGCGCTGGC CTTCCTGCGC CAGGTGCTGC CCCCGGCCGA GGGGCGGCGC
CAGCTCCACC GCCAGCTCGG CCGGATGCTC GAGGCCGAGG GCCGGCTCGC GGAGGCCGCC
GAGGAGCTGC GGGCCTCGCT TCTCCTCGAT CCCCGCCAGC CCGAGGTGGT CCAGCATCTC
GTCCATGCCA GCCAGAAGAT GGCGGCCTGG CCCCCGGCCC GGCTCGCCGT CCCCGGCCTG
ACCGAGGCCG AGGCCGAGCT GCGGTGCGGC CCGCTCGCCA CCCTCGCGCT GCATGACGAT
CCCGTGCGGC AGGGCGAGGT GGCCGCGGCC TGGATCGCCC GGCATGTGCC CGATCCGGGC
ATCCGGCTCG CCCCGGCCGG GGGCTACCGC CACGACCGGC TGCGGCTCGG CTATCTCTCG
TCGGACTTCT GCCGCCACGC CATGAGCTTC CTCATCGCCG AACTGCTCGA GCGCCACGAC
CGCAGCCGGT TCGAGGTGGT GGGCTACTGC GCCTCGCCCG AGGACGGCAG CCCCGAGCGC
GCGCGGGTGC TCGCCGCCCT CGACCGGCAT GTGCCGATCG GCCCCCTCTC CGACGAGGCC
GCGGCCCGGC GCATCCGCGC CGACGAGATC GACCTGCTGA TCGATCTCAA CGGGCTGACC
CGCGGCGCGC GGCCGGGCAT CCTGCGCTGG AAGCCCGCCC CGGTGCAGGC GACCTATCTG
GGCTATATCG GGCCGGTCCC GCTGCCCGAG CTCGACTGGC TGATCTGCGA CCGAGTGACC
GTGCCCGAGG CCGAGGCCGC CCATTACCGC CCGGCCCCGC TCCGGCTCGA GGGCTGCTAT
CAGGCCAACG ACGGGCAACG GCCCCTGCTG CCCGCCGTCG ACCGCCCGGG CGAGGGCTTG
CCCGAGGCCG CCTTCGTCTT CGCCTGCGCC TCGCATTTCT ACAAAATCAC CGAGCCCCTC
TTCGCCGCCT GGTGCCGGAT CGTCGCGGCC GTGCCGGGGT CGGTCCTGTG GCTCGTCGCG
GATACGCCCG AGGGGCAGGC GGCGCTGGCC GGCCGCTGGC AGGCGGCGGG CCTCGACCCC
CACCGGCTGA TCTTCGCCCC CCGCGTCGAT CCCGCCCGCT ACCGGGCGCG GCTGGCACTG
GCCGACCTCT TTCTCGACAC GATGCCCTAC AATGCCGGGA CCATCGCCTC GGACGCGCTC
CGGATGGGGC TGCCCGTGCT CACGCTCGCG GGGCGGACCT TCTCGGGCCG GATGGCGGCG
AGCCTCCTCA CGGCGGTGGG GCTGGAAGAT TGCATCGCCC CCGACCTCGA GGCCTATGTC
GCCCGCGCCG TGGCGATCGC CACCGACCCT GCGGCGGCCC CCGCCCTGAC GGGGCCCGCG
CTCGCCGAGC GCTGGAGCCT CACCTTGGGC GACTGCCGCG ATTTCACCCG CCGCTTCGAG
GCGGCCCTGC TCTCGGTCGC CCGCCGCGCC TGA
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| Protein sequence | MTVQPAPILP IGSVSPPLTA EQLVGLAEAA PAAAIEIYRR WLALHPERPD AWIAWFNLAV
LLEAAGEPQG ALGAAATALR QKPDLWQAAL AAGQAAEAQG DRTQALAFLR QVLPPAEGRR
QLHRQLGRML EAEGRLAEAA EELRASLLLD PRQPEVVQHL VHASQKMAAW PPARLAVPGL
TEAEAELRCG PLATLALHDD PVRQGEVAAA WIARHVPDPG IRLAPAGGYR HDRLRLGYLS
SDFCRHAMSF LIAELLERHD RSRFEVVGYC ASPEDGSPER ARVLAALDRH VPIGPLSDEA
AARRIRADEI DLLIDLNGLT RGARPGILRW KPAPVQATYL GYIGPVPLPE LDWLICDRVT
VPEAEAAHYR PAPLRLEGCY QANDGQRPLL PAVDRPGEGL PEAAFVFACA SHFYKITEPL
FAAWCRIVAA VPGSVLWLVA DTPEGQAALA GRWQAAGLDP HRLIFAPRVD PARYRARLAL
ADLFLDTMPY NAGTIASDAL RMGLPVLTLA GRTFSGRMAA SLLTAVGLED CIAPDLEAYV
ARAVAIATDP AAAPALTGPA LAERWSLTLG DCRDFTRRFE AALLSVARRA
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