| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_4043 |
|---|
| Symbol | |
|---|
| ID | 4898234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | + |
|---|
| Start bp | 1190069 |
|---|
| End bp | 1190746 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640114646 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001045893 |
|---|
| Protein GI | 126464780 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACAAG CCCTTGTGAC AGGCGGCGCC GGCCTCATCG GCGCAGGGAT CTGCCGGACG
CTGCGCGCGC ACGGCTGGGA GGTGGCCTCC TTCGATCTCG AGGAGGCGCA GGAGGCCACG
CGCTCGGTCC GCTGCGACGT GACGGACGAA GGGTCGGTGG CGACCGCCAT GGCCACGCTC
GGCTGGTCCG GCTTGGATCT CCTCGTGAAC AATGCGGGAC GGGCCGATCC GGTCACGGGC
CCCATCGCCG AGCTCACGCT CGCCGACTGG CGGCGGACGA CCGACAGTCA CCTCACAGCA
GCCTTCCTCA TGGTGCGGGC GGCGGTGCCG CTCCTGCGGC CCGGCGGATC CATCGTGAAC
ATGGCTTCGA CCCGCGCCTT CATGTCAGAG CCCGAAACGG AGGCCTATGC GGCCTCCAAG
GGCGGTCTCG TCGCACTGAC CCAGGCGCTC GCGGTGAGCC TCGGGCCGCG CCTGCGGGCC
AACGCCATCG CGCCCGGCTG GATCTCGGAC GGCGACGGGC TCCGGGACAT CGACCATGCC
CAGCATCCGG CGGGCCGTGT CGGCCGCGCG GAGGATGTGG CCGACACGGT GCTCTGGCTC
GCCGACGCGG GCTTCGTGAC CGGTCAGGTC ATCGTCGTGG ATGGCGGCAT GATGCGGAAG
ATGATCTACG CGGAGTGA
|
|---|
| Protein sequence | MRQALVTGGA GLIGAGICRT LRAHGWEVAS FDLEEAQEAT RSVRCDVTDE GSVATAMATL
GWSGLDLLVN NAGRADPVTG PIAELTLADW RRTTDSHLTA AFLMVRAAVP LLRPGGSIVN
MASTRAFMSE PETEAYAASK GGLVALTQAL AVSLGPRLRA NAIAPGWISD GDGLRDIDHA
QHPAGRVGRA EDVADTVLWL ADAGFVTGQV IVVDGGMMRK MIYAE
|
|---|
| |