| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3982 |
|---|
| Symbol | |
|---|
| ID | 4899129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | - |
|---|
| Start bp | 1124354 |
|---|
| End bp | 1125865 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640114585 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001045832 |
|---|
| Protein GI | 126464719 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGAA AATGGGCCCG CGTCGGCCTC ATCGCGCTGA GCGTGACCCT CGGCCTCGGC
AGCATTGCCG AAGCCGCAGG CGTGCTGACC ATCGGCCGGC GCGAGGACGG CACCACCTTC
GACCCGATCG CCACGGCGCA GAACGTGGAT TTCTGGGTCT TCTCGAACGT CTATGACGTG
CTCGTGCGCG TGGACAAGAC CGGGACCAAG CTCGAGCCCG GTCTGGCCGA AAGCTGGGAG
ATCTCGGAGG ACGGGCTCAC CTACACCTTC CATCTGCGCG ACGCGAACTT CTCCGACGGC
TCGCCCATCA CCGCCGAGGA CGCGGCCTTC ACGCTGCTGC GCATCCGCGA CAGCGAACTG
TCGCTCTGGT CGGACAGCTA TGCGGTGATC GAGACCGCCG AGGCGACCGA TCCGAAGACT
CTCGTCGTCA AGCTGAAGAC CCCCTCCGCG CCCTTCCTGT CCACCATGGC CATGCCCGCC
GTCTCGATCC TGTCCAAGGC AGGCGTCGAA GCCATGGGCG AGGAAGCCTA CGCCGAGAAG
CCCGTGGCCT CCGGCGCCTT CACCGTCGAG GAATGGCGCC GCGGCGACCG GGTGATCCTG
AAGAAGAACC CGGAATTCTG GCAAGCCGAC CGGGTGAGCC TCGACGGGGT CGAATGGATC
TCGATCCCCG ACGACAACAG CCGGATGCTG AGCGTGCAGG CGGGCGAACT CGACGCCGCG
ATCTTCGTGC CCTTCTCGCG GGTGGCGGAA CTGAAGAAGG ATACCAACCT CAAGGTCATG
GTCGAGCCCT CGACGCGCGA GGACCATCTG CTCCTCAACC ACGAGCACGA GCCACTGAAC
GATCCCAAGG TGCGCGAGGC GATCGACCTC GCCATCGACA AGCAGGCGAT CGTCGACACG
GTGACCTTCG GGCAGGCGCA GATTGCCAAT TCCTACATCC CGGCGGGCGC GCTCTATCAC
AACGACAACA ACCTGCTGCG GCCCCACGAC CCCGAGAAGG CCAAGGCGCT TCTGGCCGAG
GCGGGCGTGT CCGACGTGAG CCTCGATTAT GTGGTGAACG CGGGCAACGA GGTGGACGAG
CAGATCGCGG TCCTTCTCCA GCAGCAGCTG GGTCAGGCCG GGGTCACGGT CAATCTGCAG
AAGATGGACC CGAGCATGAC CTGGGACATG CTGGTGAATG GCGAATACGA CCTGTCGGTC
ATGTATTGGA CGAACGACAT CCTCGATCCC GACCAGAAGA CCACCTTCGT TCTGGGTCAC
GACGTCAACA TGAACTACAT GACGCGCTAC GAGAACGAGA CGGTGAAGCA GCTCGTGGCC
GATGCCCGGC TCGAGATGGA CCCGGCCAAG CGCGAGGCGA TGTATACCGA GATCCAGGAA
CTGTCGAAGG CCGATACCCA CTGGATCGAC CTCTATTACA GCCCCTTCAT CAACGTGACG
CGCGCCAATA TCGAGAACTT CAACCAGAAC CCGCTGGGCC GCTTCTTCCT CGAGGATACG
GTGAAGAACT GA
|
|---|
| Protein sequence | MTGKWARVGL IALSVTLGLG SIAEAAGVLT IGRREDGTTF DPIATAQNVD FWVFSNVYDV
LVRVDKTGTK LEPGLAESWE ISEDGLTYTF HLRDANFSDG SPITAEDAAF TLLRIRDSEL
SLWSDSYAVI ETAEATDPKT LVVKLKTPSA PFLSTMAMPA VSILSKAGVE AMGEEAYAEK
PVASGAFTVE EWRRGDRVIL KKNPEFWQAD RVSLDGVEWI SIPDDNSRML SVQAGELDAA
IFVPFSRVAE LKKDTNLKVM VEPSTREDHL LLNHEHEPLN DPKVREAIDL AIDKQAIVDT
VTFGQAQIAN SYIPAGALYH NDNNLLRPHD PEKAKALLAE AGVSDVSLDY VVNAGNEVDE
QIAVLLQQQL GQAGVTVNLQ KMDPSMTWDM LVNGEYDLSV MYWTNDILDP DQKTTFVLGH
DVNMNYMTRY ENETVKQLVA DARLEMDPAK REAMYTEIQE LSKADTHWID LYYSPFINVT
RANIENFNQN PLGRFFLEDT VKN
|
|---|
| |