Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3942 |
Symbol | |
ID | 4898329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 1076056 |
End bp | 1077066 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640114545 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001045792 |
Protein GI | 126464679 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.466068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGCCGG GCGCGGCCTA TTATCCGGTG CAGAGCGCGG GCGACACGCG CAGCTACGCC TTCCTGCTGG TGCCGGGCTT CACGCTTCTG GCCTTCAGTT CCGCCGTCGA GCCGCTGCGC ATCGCCAACC AGCTGTCGCA GAAGCCGCTC TACCGGTGGC GCGTCCTGTC CGAAGGCGGG CGTCCGGTCG CCAGCTCCTC GGGCATCACG GTGGCGGCCG ACGAGGCGCT GGGGCCGCTC GACCGCGAGA CCGACCTCAT GGTCTGCGCG GGCAACATCC CCTCAGCCGC AGCCGCCTCG GCGGTGGTGG CCACCGTCCA GCGCCACCAC CGCTTCGGCG GCACGGTGGG CGGCATCTGC ACCGGGGCCT TCGCGCTCGC CCATGCGGGC GTGCTGGAAG ACCGCCGCTT CACCCTCCAC TGGGAGAACC AGCCCGGCTT TCTCGAGGAT TTCCCCCGCC TCGTGCCGAC CTCGAACCGG TTCGAGAGCG CGGGCCGCAC GCTGACCTGC GGCGGCGGGG CAGCCTCGAC CGACATGATG CTCTCGCTGA TCGCGCGGGA CCATGGCGCC GATTTCGCCG CCATGGTCTC GGACATGTGC CTGCGCACCG TGCTCGCGGG GGCCGCGCCC GAGCAGCGCA GCTCGCTCGC CGCCCTGATG CGCTCGCGCA GCCCCGCGCT GATCGCGGTG GTGAAACTCA TGAACGAGCA TCTGGAGGAC ACGCTCTCGC TCGAGGAACT GTCCGACGCC GCGGGCTGCT CGCGCCGCCA TGTCGAACGC CTCTTCAAGG CCACGGTGGG CGAGACCCCG AACGGCTTCT ACCGCGGCCT GCGGCTCGAC CGGGGGCGCA ATCTGCTCAG CACCACCGAC ATGACGCTTC TCGAAGTGGC GACGGCCTGC GGCTTCAACT CGGTCTCGCA TTTCTCGAAA TGCTTCAAGG CTCGGTTCGG GACGGTGCCC ACGCGCTTCA GCCACCGCAG CCGCAGCCCG AGCCGGATGG CGCGCGCCTA G
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Protein sequence | MPPGAAYYPV QSAGDTRSYA FLLVPGFTLL AFSSAVEPLR IANQLSQKPL YRWRVLSEGG RPVASSSGIT VAADEALGPL DRETDLMVCA GNIPSAAAAS AVVATVQRHH RFGGTVGGIC TGAFALAHAG VLEDRRFTLH WENQPGFLED FPRLVPTSNR FESAGRTLTC GGGAASTDMM LSLIARDHGA DFAAMVSDMC LRTVLAGAAP EQRSSLAALM RSRSPALIAV VKLMNEHLED TLSLEELSDA AGCSRRHVER LFKATVGETP NGFYRGLRLD RGRNLLSTTD MTLLEVATAC GFNSVSHFSK CFKARFGTVP TRFSHRSRSP SRMARA
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