Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3936 |
Symbol | |
ID | 4898903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 1070107 |
End bp | 1070841 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640114539 |
Product | electron transport complex RsxE subunit |
Protein accession | YP_001045786 |
Protein GI | 126464673 |
COG category | [C] Energy production and conversion |
COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000255424 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACGG ACTTCGGCAA GATCGCCCGC GACGGGCTCT GGGACAAGAA CATCGTGGTG GGCCAGATGC TGGCGCTTTG TCCCACGCTC GCCATCACCG GGACCGCCAC CAATGGGCTC GGCATGGGGC TGGCCACCAC CGCCGTCCTC ATCCTGTCGA ACGCGGCCAT CTCGGCCCTG CGCCGCGCCA TCACGCCCGA GATCCGCATC CCGGCCTTCG TCCTCGTGAT CGCGGCGATC GTGACGGTGG TCGACCTCGC GCTGAATGCC TGGGTCCACG ACCTGCACAA GGTTCTGGGC CTCTTCATCG CGCTGATCGT CACGAACTGC GCCATTCTCG GGCGCGCCGA AGCCTTCGCC TCGCGCCACG GCATCCTCGC TTCGGCCTTC GACGGGCTGA CCATGGGCGT GGGCTTCACG CTGGCGCTGG TCCTCGTCGG GGCGGTGCGC GAGCTGGTGG GCTCGGGCAC GCTCTTCGCG CAGGCCTCGG TTCTGCTCGG GCCGCATTTC GCCTTCATGG AGCTCACGAT CCTGCCCGAC TATCCGGGCT TCCTGATCGC CATCCTGCCG CCGGGCGGCT TCATCCTGCT CGGCGTCATC CTCGCGCTGA AGTCCATCGT CGACAGCCGC AAGAAGAGCC TCGAGCAGGA GATCCGGGAT CTGCGCGTCG AACGCGTGTT CACCGCGGCC GGCGTGCTGA CGCCGCGGCT GCAAGAGGCG GGGGACGACG CATGA
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Protein sequence | MSTDFGKIAR DGLWDKNIVV GQMLALCPTL AITGTATNGL GMGLATTAVL ILSNAAISAL RRAITPEIRI PAFVLVIAAI VTVVDLALNA WVHDLHKVLG LFIALIVTNC AILGRAEAFA SRHGILASAF DGLTMGVGFT LALVLVGAVR ELVGSGTLFA QASVLLGPHF AFMELTILPD YPGFLIAILP PGGFILLGVI LALKSIVDSR KKSLEQEIRD LRVERVFTAA GVLTPRLQEA GDDA
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