| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3906 |
|---|
| Symbol | |
|---|
| ID | 4898737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | - |
|---|
| Start bp | 1041469 |
|---|
| End bp | 1042500 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640114509 |
|---|
| Product | WD-40 repeat-containing protein |
|---|
| Protein accession | YP_001045756 |
|---|
| Protein GI | 126464643 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCA CGACCAGACT GAGCCGTCGC AGCTTCGGCC TTCTGACCGC CGGAAGCGTC
GCGAGCCTTG CCATCGGGGC GCCGAGCCTG ATCCGCGCCC AGACGGCGGT GAATTTTGCC
GTCCCCAACC CCTCGGCCCT GACCTGGCTG CCCTACTGGG TGGCGGTGGG CGAAGGCTAC
TTCGCCGAAG AAGGCTTCGA GCCCCGGCTC GAGGCCATCG ACGGCTCTTC GGCCGTGCTT
CAGGCCATGT CGGCGGGACA GGCACAGATC GGCGCGCCGG GACCGGGCCC GACGCTCGGC
GCGCGCGCGC GCGGGGTGGA CGTCAAGTTC CTCTACAACC TCTATCCGAA GTCGGTCTTC
GGCCTGCTCG TGAAGGAGGA CAGCGCCTAT CAGACCCCGG CCGACCTCAA GGGCCAGGTC
ATCGGCGTGG GCACCGCGGA CGGGGCCGAG GTCTCCTTCA CCCGCGCCAT CCTGACCGAG
GCCGGCATGA CCGAGGGGGC CGATTACAGC TTCCTGCCGG TGGGCGACGG CGGCACGGCG
GCGGTGGCCT TCCTGCGCGA CGAGGTGGCG GCCTATGCGG GCGCGGTCTC GGATGCGGCG
ATCCTTGCCG CGCGCGGCCT CACGCTGCGC GAGATCACGC CCGAGGCCTT CCTCGGCTTC
TTCGGCAACG GCATCGCCAT GCTGGAAAGC CAGATGCAGG CCATGCCCGA GCTTGCCCCC
GCTTTCGGCC GGGCGCTGGT GCGCGGCACG CGCTTCGCCT CGGATCCGGC CAACAAGGAG
AAGGCACTGG CCCATTGCGC GGCCGGCAAC CCGCAGGAGG GCGAGCAGGA TTACGCGGCC
TCGCTCTATG ACGGCGTGGT CAACCGCATG ACCCCGACCG AGGCCTTCAT CGGCAAGGGC
TACGGCTACC AGCCGCCCGA GCACTGGCAG GCGATCCACG ATTCCGCCGT GGCTTCGGGC
GCCCTGTCCG AGCCGATCGA GGATCTGGCC TCGGTCTATA CCAACGAGTT CGTCGAAGGC
TGGAACAGCT GA
|
|---|
| Protein sequence | MTSTTRLSRR SFGLLTAGSV ASLAIGAPSL IRAQTAVNFA VPNPSALTWL PYWVAVGEGY
FAEEGFEPRL EAIDGSSAVL QAMSAGQAQI GAPGPGPTLG ARARGVDVKF LYNLYPKSVF
GLLVKEDSAY QTPADLKGQV IGVGTADGAE VSFTRAILTE AGMTEGADYS FLPVGDGGTA
AVAFLRDEVA AYAGAVSDAA ILAARGLTLR EITPEAFLGF FGNGIAMLES QMQAMPELAP
AFGRALVRGT RFASDPANKE KALAHCAAGN PQEGEQDYAA SLYDGVVNRM TPTEAFIGKG
YGYQPPEHWQ AIHDSAVASG ALSEPIEDLA SVYTNEFVEG WNS
|
|---|
| |