Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3847 |
Symbol | |
ID | 4898576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 977308 |
End bp | 977991 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640114452 |
Product | hypothetical protein |
Protein accession | YP_001045699 |
Protein GI | 126464586 |
COG category | [R] General function prediction only |
COG ID | [COG3443] Predicted periplasmic or secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.496853 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACCG TCCTTTCACG CCCCCTGAGC ATCCTCGCCG CCAGTGTGGC GCTCGCAGTG GCCGCCCCCG CGCTTGCCGA GAAGCCGCAC GACCACGGGC ACGATCATGC GCACGGCCAT GGCCATGACG AGGCCCACAG CCACGCTTCG GACGAGATCG CCAAGGGCGT CTTCAAGGAC GAGCAGGTCG CCGACCGCCC GCTCTCGGAC TGGCAGGGCG ACTGGCAGTC GGTCTATCCG CTGCTGGAGG ACGGCACGCT GGCGTCGGTG ATGGCGCACA AGGCCGAGCA TGGCGACAAG ACGGCCGAGG ACTATCTCGC CTACTACCGG ACGGGCTACG AGACCGACGT GAACCGCATC GAGATCGACG GCGACCGGGT GACCTTCCAC GGCGCGGGCG CGCCGGTCTC GGGGCAGTAT GAGGAGGACG GTCACGAAGT GCTGACCTAC AAGGCCGGCA ATCGGGGCGT CCGCTTCATC TTCGAGAAGG TGAGCGGAGA CGAGGCCGCG CCGAAGTTCA TCCAGTTCAG CGACCACCGG ATCGCGCCGT CGACGTCGGA CCACTATCAC CTCTACTGGG GCAACGACCG CGCGGCGCTC CTTCAGGAGG TGACGCACTG GCCGACCTAT TACCCCGCCG AGCTGAGCGC CGAGGAGATC GTTCAGGAGA TGCTCGCGCA CTGA
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Protein sequence | MQTVLSRPLS ILAASVALAV AAPALAEKPH DHGHDHAHGH GHDEAHSHAS DEIAKGVFKD EQVADRPLSD WQGDWQSVYP LLEDGTLASV MAHKAEHGDK TAEDYLAYYR TGYETDVNRI EIDGDRVTFH GAGAPVSGQY EEDGHEVLTY KAGNRGVRFI FEKVSGDEAA PKFIQFSDHR IAPSTSDHYH LYWGNDRAAL LQEVTHWPTY YPAELSAEEI VQEMLAH
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