| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3842 |
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| Symbol | |
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| ID | 4898108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | - |
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| Start bp | 972051 |
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| End bp | 973361 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640114446 |
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| Product | D-amino acid dehydrogenase small subunit |
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| Protein accession | YP_001045694 |
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| Protein GI | 126464581 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.190955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGATCG TGGTTCTGGG CGCGGGCGTC GTCGGGGTCA CGTCGGCTTA CGAGCTGGCG
CGGGCGGGGC ACGAGGTGAC GGTGGTGGAT CGCCAGCCCG CGGCGGCGCT CGAGACCTCC
TTCGCCAATG CGGGCGAGAT CAGCCCGGGC TATGCCTCGC CCTGGGCCGC GCCCGGCATC
CCCGCCAAGG CGCTGCGCTG GATGTTCATG AAGCACGCGC CGCTGGTCAT CCGGCCGCGG
CTCGACGCGG CGCAGGTCCG CTTCCTTCTG GCGATCCTGC GCAACTGCAC GCCCGCGGCC
TATGCGCAGA ACAAGGGCCG CATGGTGCGG CTTGCGGAAT ATTCGCGCGA CTGCCTCACC
GATCTGCGCG CCACGACCGG CCTCGCCTTC GACGAGCGCC AGCAGGGCAC GCTTCAGCTC
TTCCGCTCGC AGAAGCAGCT CGACGCCGCC GCGCGCGACA TCGAGGTGCT GCGCGCAGGC
GGGGTGCCGT TCGAGCTTCT GGATGCCGAC GGCTGTCTCG CCGCCGAGCC GGGTCTGCGG
GCCGCGCGCG ACAGGATCGC GGGCGGGCTG CGCCTGACGG GCGACGAGAC GGGCGACTGT
TTCAAGTTCA CGCAAGGGCT CGCGGGTCTG GCCGAGGAAG GCGGCGTGCG CTTCCGCTAC
GGAACCGGCG TCGAGCGTCT GAGGGTCGAG GGCGGCCGCG TCACGGGCGT CGAGACCACC
AAGGGCACGT TCCTCGCCGA TGCCGTCGTC GTGGCGCTCG GCTCCTATTC GCCCGCGCTG
GTCGCGCCGC TCGGGCTGCG ACTGCCGGTC TATCCGGTGA AGGGCTATTC GATCACAGTG
CCCATCGTCG ATGCCGAGCG GGCGCCGGTC TCGACCGTGA TGGACGAGAC CTACAAGATC
GCGATCACGC GGCTCGGCAC CCGGATCCGG GTGGGCGGCA TGGCCGAGGT GGCGGGCTTC
AGCGCCACCC TGCCCCCGGC ACGGCGCGAG ACGCTCGCCA TGTCCGTGAA CGACCTCTTC
GGCGGCGCGG GCGATCTGTC GCGCGCGAGC TTCTGGACCG GCCTCCGGCC GATGACGCCG
GACGGCACGC CCGTGGTGGG CCGCACGCCG GTGGCGGGCC TCTGGCTCAA CACGGGGCAC
GGGACGCTCG GCTGGACGAT GGCCGCAGGC TCGGCGCGGG TGCTGTCGGA TCTCATCGAC
GGGCGCGCGC CCGAGATCGA GAGTGCCGAT CTCGGCATCG AGCGCTATGT CGCCCCAGAC
CGCCGCGCGC GGCCCGCGGT CAGGCTCAAC CCGGCCCGGC AGGCGGGCTG A
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| Protein sequence | MRIVVLGAGV VGVTSAYELA RAGHEVTVVD RQPAAALETS FANAGEISPG YASPWAAPGI
PAKALRWMFM KHAPLVIRPR LDAAQVRFLL AILRNCTPAA YAQNKGRMVR LAEYSRDCLT
DLRATTGLAF DERQQGTLQL FRSQKQLDAA ARDIEVLRAG GVPFELLDAD GCLAAEPGLR
AARDRIAGGL RLTGDETGDC FKFTQGLAGL AEEGGVRFRY GTGVERLRVE GGRVTGVETT
KGTFLADAVV VALGSYSPAL VAPLGLRLPV YPVKGYSITV PIVDAERAPV STVMDETYKI
AITRLGTRIR VGGMAEVAGF SATLPPARRE TLAMSVNDLF GGAGDLSRAS FWTGLRPMTP
DGTPVVGRTP VAGLWLNTGH GTLGWTMAAG SARVLSDLID GRAPEIESAD LGIERYVAPD
RRARPAVRLN PARQAG
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