Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3822 |
Symbol | |
ID | 4898588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 953042 |
End bp | 953572 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640114426 |
Product | RNA polymerase sigma factor |
Protein accession | YP_001045674 |
Protein GI | 126464561 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.538946 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGAAA CAGATGAGAT CCTGTCCGAA CTGACCCCGC TCCGGCGCTA CGCCCGGTCG CTCACCCGCG ACGAGGCGGA GGCCGAGGAT CTCGTGCAGG AGGCGCTTCT GCGTGCGCAT GAGCGGCGGG CGAGCTTCCG GCGCGGCAAG GGGCTCAGGG TCTGGCTGAT GTCGATCCTG CACAACCTCT TCATCGATGC GCTGCGCAGC CGCCGCGCCC GCGAGCGGCG CGAGGCGGCG GCGATGGAGG CGGCGCCCCT GTCGCACCCG GCCTCGCAGG AGAGCGCGGT GCGGCTGGCC CAGATCCGCG AGGCCTTCGC GCGCCTGCCC GAGGAGCAGC GCTCGGCGCT GCATCTCGTG GCGATCGAGG GGCTGTCCTA TGCCGAGGCC GCCGAGGTGC TCGGCGTGCC GCAGGGCACG CTCATGTCGC GGATCGGCCG GGCGCGCGCC GCGCTCCGGG CCTTCGAGAA CGGAGAGGCG GCGCGCCAGC CGCTTCGGGT GGTGGGAGGA CGCGATGCGG ACGATGCATG A
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Protein sequence | MRETDEILSE LTPLRRYARS LTRDEAEAED LVQEALLRAH ERRASFRRGK GLRVWLMSIL HNLFIDALRS RRARERREAA AMEAAPLSHP ASQESAVRLA QIREAFARLP EEQRSALHLV AIEGLSYAEA AEVLGVPQGT LMSRIGRARA ALRAFENGEA ARQPLRVVGG RDADDA
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