| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3810 |
|---|
| Symbol | |
|---|
| ID | 4898561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | - |
|---|
| Start bp | 941938 |
|---|
| End bp | 943623 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640114414 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001045662 |
|---|
| Protein GI | 126464549 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.296432 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAGG CCTCCATGAA ACTGACCATA AAGATCAAGC TCGCCATGAC CTTCCTTCTG
GTGTTCCTGC TCATGGGGGC AGGCACCATC TTCGGGCTCC TGGACCTGCG CTCCGCGAAC
CAGACGCTGC GGTCCATCGT GGACGTCCAG GCCGCCCGGG TCGAAGCTGC CAGCCGGCTC
GAGATCCAGC AGAGCGAGTT CAACGTGGTG CTGCGCGATT ATGTGACCGC CCCGACGGCG
ACCGAGCGCG CCAAGCTCAA GCAGGACATC ACCCGGATCC GCGCCGAAAT GAGTGCCAGC
ATCGAGCGGC TCCAGACACT CGCGGATGCC GAGGGAGAGA AGCTGATCGC CGCCTATGCC
GATCAGCGCA AGGCCGCCGC CGCCTTGAAC AATCGGGTCT TCGCGCTGGC GGACGCGGGC
GATGTCGCCG GCGCCTCCCG CCTGCTGGCG GGCGAGTCCC GCGCGGGCAT GGTGAAGCTC
GCGGCGAACC TCGAGACCTT CCGCACGCTC TACAAGGACC AGATGACCGA GGCCACGGCC
GAAGCGGATC GCGAGCTGAC GGAGAGCCTC GTCAATCTGT CGGCGCTCGC GCTGGCGGGC
ATTCTCGCCG GAACCATCGC GGCCACCTTC CTCATCCTCT CCATCGGGCG CAGGCTCGGC
CGGGCGCTGG CGCTGTCGCA GCGCGTCGTG CAGGGGGATC TGACCACCCT GGCCGAGGAG
CGCGGCTCGG ACGAGATCGC GCAGCTCCTC AAGGCCAACA ACGCCATGAT CGTGAAACTG
CGCGAGGTTC TGGGGCGGGT GTGGCTCGCC ACCGACCAGG TGGCGGCGAA CAGCCAGACC
ATGGCCGCCA CCTCCGAACA GCTGTCGCAG GGCAGCAGCG AACAGGCGGC CTCCACCGAA
GAGGCCTCGG CCTCGGTCGA GGAGATGGCC GCCAACATCC GCCAGACCGC CGACAGTGCG
GGTGAGACCG AACGGATCGC CGCAAAATCG GCCGAAGATG CGCGGGCCTC GGGCGATGCC
GTGCGCGAGG CGGTGGCAGC GATGGCCTCC ATCGCCGACC GCATCCTCAT CGTGCAGGAG
ATCGCGCGCC AGACCGACCT TCTCGCCCTC AATGCCGCGG TCGAGGCCGC GCGGGCGGGC
GAGCACGGGC GCGGTTTCGC CGTCGTGGCC AGCGAGGTCC GCAAGCTCGC CGAGCGCAGC
CAGGCGGCGG CGGCCGAGAT TTCCGCGCTG TCGGCGCGCA CGTCCGGCGT GGCGGCCACG
GCGGGCGAGA TGCTCCAGCG GCTCGTGCCG GACATCGAGC GCACGTCCGG CCTCGTCTCC
TCGATCTCCG TCGCCTCGCG CGAACTGTCG ACGGGGGCGC AGCAGGTGGC GCTCGCCATC
CAGCAGCTCG ATCAGGTCAC CCAGCAGAAC AGCACCGCCG CTGAAGCTCT GGCGAGCGGG
GCGGGTGAAC TCTCCGTCGA GGCGGACCAG CTGAAGGAGG CGGTGGGCTT CTTCCGCACC
GGAGAGACAC AGGCCCCGGT CGCGCCGCAG ACGCGCGCGG TTGTGCCGCA CGCACGGCCT
TCGGCGCGCG CCCTGCCTCA GCCGTCCCTG CGGCCGGTGC GGTCCTCCAA GGGCTTCGAC
TTCGACATCG GCGAGAGCGA GTTCGACGAG CTCGACGCGG CCTTCCAGCG CGCGGGCACC
CGCTGA
|
|---|
| Protein sequence | MMKASMKLTI KIKLAMTFLL VFLLMGAGTI FGLLDLRSAN QTLRSIVDVQ AARVEAASRL
EIQQSEFNVV LRDYVTAPTA TERAKLKQDI TRIRAEMSAS IERLQTLADA EGEKLIAAYA
DQRKAAAALN NRVFALADAG DVAGASRLLA GESRAGMVKL AANLETFRTL YKDQMTEATA
EADRELTESL VNLSALALAG ILAGTIAATF LILSIGRRLG RALALSQRVV QGDLTTLAEE
RGSDEIAQLL KANNAMIVKL REVLGRVWLA TDQVAANSQT MAATSEQLSQ GSSEQAASTE
EASASVEEMA ANIRQTADSA GETERIAAKS AEDARASGDA VREAVAAMAS IADRILIVQE
IARQTDLLAL NAAVEAARAG EHGRGFAVVA SEVRKLAERS QAAAAEISAL SARTSGVAAT
AGEMLQRLVP DIERTSGLVS SISVASRELS TGAQQVALAI QQLDQVTQQN STAAEALASG
AGELSVEADQ LKEAVGFFRT GETQAPVAPQ TRAVVPHARP SARALPQPSL RPVRSSKGFD
FDIGESEFDE LDAAFQRAGT R
|
|---|
| |