Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3792 |
Symbol | |
ID | 4899004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 919053 |
End bp | 919835 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640114396 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_001045644 |
Protein GI | 126464531 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.643818 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGTTT CCCCCGATCT TCCCCGCGCC CGCCGCGCCC TGATCGCCGA GCGTCTGCGC GCGGGCCAGC CCGTCGTGGC CGCCGCGCTG GCCGAGGAGT TCGGCGTGTC GGAGGATTCG ATCCGCCGCG ATCTCCGCTC CCTCGCACAG GAGGGGCGCT GCCAGCGCGT CTACGGCGGC GCCCTGCCGC TCTCGCCGGC CTCGACCCCC ATCGGGGCAA GGCTGGGCGA AGAGGCCGCG CGCAAGCACG CCCTCGCGCG CCGCGCGGTG GATCTCATCC GGCCCGACCA GACCCTGTTC CTCGATGCGG GCAGCACGCT CGTGCCGCTG GCCGGGCTGC TGCCCGAAGG GCAGGGGCTG CGCGTCGTCA CCAACTCGAT TCCGGCCGCC GCCGCCCTGA TCGGCCGCAG CGGCATCGCG CTGGTCCTGA TCGGGGGCGG CGTCAATATG ACCGTCGGCG GGGCGGTCGA TGCGCAGGCC CTGTCGGACC TCGCGCGTCT GCGGATCGAC CTCTGCTTCC TCGGCGCCTG CGCCCTCTCG CCCGAAGAGG GGCTCGCGGG GTTCGAGATG GACGATGTGG CCTTCAAGCG CCGGCTCCTG CAGCAGAGCC GGGCGAGCGC GCTGATGATG ACGAACGGCA AGCTCGGCAC GCAGGCTCCC TTCGCCATCG CCCACGCGGA CGAGATCGGC CATTACATCC TCGAGGCCGA TGCGCCCGCG GAGATGGAGC TGCGGCTCCG CCGGACCGGC GCCACCGTGC TCCGCGCGGC CCCGCCCGCC TGA
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Protein sequence | MHVSPDLPRA RRALIAERLR AGQPVVAAAL AEEFGVSEDS IRRDLRSLAQ EGRCQRVYGG ALPLSPASTP IGARLGEEAA RKHALARRAV DLIRPDQTLF LDAGSTLVPL AGLLPEGQGL RVVTNSIPAA AALIGRSGIA LVLIGGGVNM TVGGAVDAQA LSDLARLRID LCFLGACALS PEEGLAGFEM DDVAFKRRLL QQSRASALMM TNGKLGTQAP FAIAHADEIG HYILEADAPA EMELRLRRTG ATVLRAAPPA
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