| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3784 |
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| Symbol | |
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| ID | 4899186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | - |
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| Start bp | 909513 |
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| End bp | 911447 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640114388 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001045636 |
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| Protein GI | 126464523 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.60396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATCC TGTCGCCCCG AACGATCCGG CTTCTGGCCG GGAGCGCCGC CCTGAGCGGG
TCCTGCGTCA CCGCCCATGC GCAGGATCTG GCCTTCTCGC TCGATCCCAT CGTGGTGCAG
GCGCGCGACG ATTTCGCCGA AGCCGCCGAC CGCGCCACCT CGATGTATGT CGCCGATGCC
GAGCTGGAGC GCGCGCGCAC CGGAGACCTC AAGGACGTCT TCGCGGGCAT CGCCTCTGTC
TCGGTCGGAG GGGCGCTGCC CCTCACGCAG AAGATCTTCG TGAACGGCGT CGACATGCTG
AATCTCGGCG TCAGCATCGA CGGGGCCGCG CAGAACAACC GCGCCTTCCA CCATGTCTCG
GCCAATGCGA TCGATCCGGG GCTGCTCAAG CAGGTGCGCG TGGATGCCAC GATCTCGCCG
GCCGATGCCG GGCCCCATGC GCTCGCGGGC TCGGTCGTGT TCGAGACGGT CGATGCCGCC
GACGTCCTCA GCGAAGGGCA GCGCTTCGGC GGCACCCTGC GCCTGAGCTA CGGCGACAAC
GGCAAGACGG CGCAGGGCGC CCTGACCCTC GCCGGGCGGG AGGGCGGCTT CGAGTGGCTG
GCCTATGCCA AGCGCGCCAC GGGCGACGAT TACGAGGATG GAGACGGGGC CACACGGCTC
GGGACGGCGG CCAATCTCAA GAGCGCGGCG GGAAAGCTCG CCTATGAGAG CGAGGGCGGC
CACCGGTTCG AGCTGTCGGC GCTGCGCCTG AGGGACGACG AGCTGCGCCA GTTCCGCGCG
AATTTCGGCG GTCTGGGCGG GGTGGTCGAT CAGCTGCGCC TCTACGACAC GACGCGGGAA
AGCTGGTCAT TCTCCTACGA GAACACGCAA GGTGAGGGGA TGTGGGATCC GAGCCTCCGG
CTCGGCTATT CGGAAAGCGA CGTCGTCATC CCCCTGCCCT ACGACAGCAA CGGCCTGTCG
GGCACATGGT CGGCCACGCT GCAGAACGAT TTCCACCTGA ACGCCACCGA CCGGATCTCG
GCCGGCCTCG ACTGGCAGCG CCGTTTCGGG GAATATTCGA GCCCGACCTT CGGCGAGTTC
CTCGAGGAGA CATCGCACAA CCTCGGCCTT TTCGTGCAGG CGCGGCTCGA GCCCACCGAT
CGCTGGCGGC TCTCCTTCGG CGGCCGCCTC GACCGGCAGA AGTTCGAAGG CGTCGACGGC
AGCGACCTCG GCCACTCGGG GCCCTCGGGC AACCTCTCCG CAAGCTACGC CCTGACCGAG
AGCCTCACGC TGCGCGGCGG CCTGTCCTCG ATCTTCGGCG GCATCGACAT CGAGGACAAT
TACATCTTCC GGCCGAGCTG GAGCTACGAC AGCCTCCGGC CGTCGCGGGC GCGGAACGCG
AGCCTCGGCT TCGACTGGGA CGCGGGCGCC CTCAAGGTCG GAGGCGAGCT CTTCCTGACC
GAGATCAACC GCGCGCGCAG TGCCACCGAA ATGTTCGACT TCGAGAGCCG CGGCTTCAAC
CTCGGCGCGA CCTACGGCTG GGACGGTGGC TTTGCGCGCG TCACCCTCTC CCACAGCGAG
GTGAAGGTGG ACGGCGCGAA GGCCGCGGGC TACGAGGCGC TCGACTTCGG CGCCCCTCTG
GGCACGGTGG CCGCGGTCGA GCTTCAGCAG GACACGTCAG TTGCGGGGCT GCGGCTCGGC
GGCGGGCTCG ATCTCGCGCT CGACCACGAC ATGCCCGCTA CGGCCGAACG GGATCTCGCG
GGCTATTCGG TGGTGAACCT CTTTGCCGAA TATGTGCCGC CTGAGGCGCA GAACCTCACG
CTCCGGCTGC AGGTCGACAA CCTATTCGAC AAGACCTATG CGGACCGCGC GACCTACGGG
GCGGAATACA GCGACGTCAC CTCGCTGAAG GAGCCGGGCC GGACGATCAC GCTCAGCGCG
GTCACGCGCT TCTGA
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| Protein sequence | MSILSPRTIR LLAGSAALSG SCVTAHAQDL AFSLDPIVVQ ARDDFAEAAD RATSMYVADA
ELERARTGDL KDVFAGIASV SVGGALPLTQ KIFVNGVDML NLGVSIDGAA QNNRAFHHVS
ANAIDPGLLK QVRVDATISP ADAGPHALAG SVVFETVDAA DVLSEGQRFG GTLRLSYGDN
GKTAQGALTL AGREGGFEWL AYAKRATGDD YEDGDGATRL GTAANLKSAA GKLAYESEGG
HRFELSALRL RDDELRQFRA NFGGLGGVVD QLRLYDTTRE SWSFSYENTQ GEGMWDPSLR
LGYSESDVVI PLPYDSNGLS GTWSATLQND FHLNATDRIS AGLDWQRRFG EYSSPTFGEF
LEETSHNLGL FVQARLEPTD RWRLSFGGRL DRQKFEGVDG SDLGHSGPSG NLSASYALTE
SLTLRGGLSS IFGGIDIEDN YIFRPSWSYD SLRPSRARNA SLGFDWDAGA LKVGGELFLT
EINRARSATE MFDFESRGFN LGATYGWDGG FARVTLSHSE VKVDGAKAAG YEALDFGAPL
GTVAAVELQQ DTSVAGLRLG GGLDLALDHD MPATAERDLA GYSVVNLFAE YVPPEAQNLT
LRLQVDNLFD KTYADRATYG AEYSDVTSLK EPGRTITLSA VTRF
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