| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3640 |
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| Symbol | |
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| ID | 4899013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | - |
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| Start bp | 738799 |
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| End bp | 739554 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640114248 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001045502 |
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| Protein GI | 126464389 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.137586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTGA GCGAAGGGCG CGGCCTCGTC CTGACGGGCG GGGCCTCGGG CATTGGGCGC
GGCATCCTCG AGATGGCGGT GGCGCAGGGC TACCGCGTGG GGGTGCTGGA TCTGGCAGGC
CCCGCCCTCG AGGCGGTGGC GTCCGACTTC GCGGGCGCGG CCGTCCATGT CGCTGCCACC
GACATCACCG ACGAGGCGGC GGTCGAGGAG GCGTTCTCAG CGCTCGACGC CGCCTTCGGC
GCGCCGTGGG GCGTCATCAA CTGCGCGGGC ATCGGCCAGA ACACGCCCTT CGCCGAGACC
ACGGTCGCGC AGTTCCGGCG CATCCTCGAC GTGAACGTGA TCGGCAGCTT CCTCGTGGCC
CGCGCCGCCG CCGCCCGGAT GAAGGGCGGG GTCATCGTCA ACATCACCTC CGTCTCGGGC
ATTCAGGGCA GCACCGGGCG GGCGGCCTAC GGCACCTCCA AGGGCGCGGT CAACACGCTG
ACCCGCATCC TCGCGACCGA GCTCGCGCCG CAGGGCATCC GCGTCAATGC CATCGCCCCG
GGCCCGGTCG AGACGCCGAT GGCGGCCCGC TGGCACGACG AGGCCACGCG CCGCACCTGG
GTCTCGCGCG TGCCGATGGG GCGCTACGGC ACGGTGGAGG AGATCGCCGC CATGGCCCTC
ACGCTGATCG ACGACCGGAT CTCGGGCTAT GTGAACGGTC AGGTCATCGC GGTGGACGGC
GGCTTCAGCA GCGCGGGGCT GATGGAGGCG GACTGA
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| Protein sequence | MAVSEGRGLV LTGGASGIGR GILEMAVAQG YRVGVLDLAG PALEAVASDF AGAAVHVAAT
DITDEAAVEE AFSALDAAFG APWGVINCAG IGQNTPFAET TVAQFRRILD VNVIGSFLVA
RAAAARMKGG VIVNITSVSG IQGSTGRAAY GTSKGAVNTL TRILATELAP QGIRVNAIAP
GPVETPMAAR WHDEATRRTW VSRVPMGRYG TVEEIAAMAL TLIDDRISGY VNGQVIAVDG
GFSSAGLMEA D
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