| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3624 |
|---|
| Symbol | |
|---|
| ID | 4898603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | - |
|---|
| Start bp | 716615 |
|---|
| End bp | 717763 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640114232 |
|---|
| Product | galactonate dehydratase |
|---|
| Protein accession | YP_001045486 |
|---|
| Protein GI | 126464373 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.694628 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.369645 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCA CTGCGCTCAA GACCTTCATC GTGCCGCCGC GCTGGCTGTT CCTGAAGATC
GAGACCGATG AGGGGATCGT CGGCTGGGGC GAGCCGGTGG TCGAGGGCAA GGCGCTGACG
GTCGAGGCCG CGGTGCACGA GATGGCCGAC TATCTGATCG GGCAGGACCC GCTCAGGATC
GAGGACCACT GGCAGGTGCT CTACCGCGGC GGCTTCTACC GCGGCGGTCC CGTGCTGATG
AGCGCGCTGG CGGGCATCGA TCAGGCGCTG TGGGACATCA AGGGCCGCGC GGCGGGCCTG
CCGGTGCATC AGATGCTGGG CGGCGCCTGC CGAGACCGGA TCCGCGTCTA TTCCTGGATC
GGCGGGGACC GCCCCGAGGA TGTGGCGCAA GGCGCGCGCG AGGCCGTGGC GCGCGGCTTC
ACCGCGATCA AGCTGAACGG GGCGGAAGAG CTTCAGATCG TCGACGGGCA CGACAAGATC
GACCGGATCG TGGAGACCAT CGGCGCCGTG CGCGACGCGG TCGGGCCGCA TGTGGGGATC
GGCGTCGACT TCCACGGCCG GGTGCAGAAG CCGATGGCCA AGGTGCTGAT CCATGCCCTC
GATCCCTTCC GGCTGATGTT CATCGAAGAG CCGGTGCTGT CGGAGAACCT CGAGGCCCTG
CCCGAGATCA CCCGCGGCAC CTCGACGCCC ATCGCTCTGG GCGAGCGGCT CTATTCCCGC
TGGGATTTCA AGCGCGTGTT CGAAACGCGC TGCGTCGACA TCATCCAGCC CGACCTCAGC
CACGCGGGCG GCATCACCGA ATGCCGCAAG ATCGCGGCGA TGGCCGAGGC CTACGACATC
GGCGTGGCCT TCCATTGTCC GCTCGGACCC ATCGCGCTGG CCGCCTGCCT GCAGGTCGAT
GCGGTCTCGC ACAATGCCTT CATCCAGGAG CAGAGCCTGG GCATCCACTA CAATGCCGGA
AGCGACCTCC TGGATTATCT CGTGGACCCG TCGGTGTTCC GCTACGAGGC GGGCGCCGTC
GAGATCCCGA CCGGCCCGGG CCTCGGGATC GAGATCGACG AGGGCGCCGT CCTTCGGGCT
GCCGAGACCG GCCACCGCTG GCGCAACCCG CTCTGGCGCC ACGCGGACGG CTCGGTGGCG
GAATGGTGA
|
|---|
| Protein sequence | MKITALKTFI VPPRWLFLKI ETDEGIVGWG EPVVEGKALT VEAAVHEMAD YLIGQDPLRI
EDHWQVLYRG GFYRGGPVLM SALAGIDQAL WDIKGRAAGL PVHQMLGGAC RDRIRVYSWI
GGDRPEDVAQ GAREAVARGF TAIKLNGAEE LQIVDGHDKI DRIVETIGAV RDAVGPHVGI
GVDFHGRVQK PMAKVLIHAL DPFRLMFIEE PVLSENLEAL PEITRGTSTP IALGERLYSR
WDFKRVFETR CVDIIQPDLS HAGGITECRK IAAMAEAYDI GVAFHCPLGP IALAACLQVD
AVSHNAFIQE QSLGIHYNAG SDLLDYLVDP SVFRYEAGAV EIPTGPGLGI EIDEGAVLRA
AETGHRWRNP LWRHADGSVA EW
|
|---|
| |