| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3539 |
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| Symbol | |
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| ID | 4898810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | + |
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| Start bp | 622008 |
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| End bp | 624182 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640114148 |
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| Product | quinoprotein glucose dehydrogenase |
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| Protein accession | YP_001045402 |
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| Protein GI | 126464289 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.331402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATCC ATCCCATTCG TTCCCTCCCC CTTCTGGCGT TGATCGCCGC AACCCCCCTC
GCCGCGCAGG TGGAGCCCGC GCCGGGCCTC CCGGAGGCCG ATGTGGCGCC ACAGCAGGCC
GAACCGGCGC CGGACCTGCA GCCGGGAGAC GACGCTCCGA CAGGGCAGAC CGAGCAGGCA
GCGCCGGAGG GGGCAGCCTC TTCGGAGGGC CGCAGTGTCG CGCAAGCGGA GGCCGAGGCT
CAGGCCGGCG TGGAGCGTCC GGCGCAGCCG CAGCCCGAGG TGGGGGCGGA CTGGCCCTTC
TGGGGCGGCG ATGCGCAGGC CACGCGCTAT TCGCCGCTGG ACGAGATCAC CCCGGAGAAC
GTGGCCGGCC TCGAGCGGGC CTTCGTCTAC CGGACGGGCG ACATGCCGAG CGGCGATGCG
GAAGGAAAGT ATTCCCCGGA GACCACGCCT CTGAAGGTTG GCGACGATCT CCTGATGTGT
TCCGCCATGA ACATCCTCAT CTCCATCGAT GCCGAGACCG GCGAGGAAAA CTGGGGCTAC
GATCCCGGCG TGCCCGCAGA AGCCATCCCC TATGGCGCCT CCTGCCGCGG GGTCTCGATC
TACACGGATC CGGCGGCCTC CGAGGGCGCG CTCTGCGCGA CGCGGGTGAT CGAGGGTACG
CTGGACGCCA AACTCGTGGC CGTCGACGCC TCCACGGGCG CCCCGTGCGA GGGGTTCGGC
GAGAACGGCA CGGTGGATCT CTGGCAGGAT ATCGGCGAGC GGGTGCCCGG CTGGTATGCG
GTCACGGCCC CGCCCGCCGT GGTGCGCGGG ATTCTGGTGA CCGGGGCTCA GGTGAAGGAC
GGTCAGGCCG AGGATGCACC CTCGGGCGTG ATCCGCGGCT ATGACGCGGT GACCGGCGAT
CTCGTCTGGG CCTGGGACCT TGCGGCCCCC GAGGCCAATC GCGCCGGCCC GCCCGAAGGA
GAGGTCTATA CGCGCGGCAC GCCCAACATG TGGACGACCG CCGTTGCCGA CGAAGAGCTG
GGATATGTCT ATCTGCCGAT GGGCAATTCT TCGGTGGACT ATTACGGCTC GAACCGGTCG
GAGGCGGAGA ACGCCTACGC CACCTCGCTG GTGGCGCTGG ACGCCACCAC GGGCGAGGAG
GTGTGGCACT TCCAGACGGT CCGGCATGAC GTGTGGGACT ACGATCTCGG CAGCCAGCCC
ACGCTCCTCG ACTGGCAGGG CACGCCGGCG ATCCTCCTGC CCTCGAAACA GGGCGATCTC
TATATCCTCG ACCGGGCGAC CGGAGAGCCG CTGACGCCGG TGGAAGAGCT GACCGGCCTG
CCGCAGGGCG ACGTGGAGCC AGACTTCATC TCGCCGACCC AGCCTGCCTC GGCCTGGGCC
ACGCTGCGGA TGCCGCCGCT CGAGCCGAAG GACGCCTGGG GCTTCACCGC GATCGACCAG
CTCTGGTGCC GCATCCAGTT CCACCGCGCC AATTACGAGG GCTATTTCAC GCCCCCCTCC
AGCGACCGGC CGTGGATCCA GTATCCGGGC TACAACGGCG GCTCCGACTG GGGCTCCGTC
GCGGTGGACA GCCAGAGGGG CCTCATCATC GCGAACTACA ACGATGTGCC GAACTACAAC
CGGCTCGTTC CGCGCGATGA GGTCGAGAGC GTGCCGATCC ACGAGCAGGA GAGCGGCGCG
CAGTCGGGCC AGAATGCCGA GGGCGCGGCC GATCCTCAGG CGGGCTCTCC CTACGGCATC
AGCGTCAATG CCGGCTGGCG CAACGAGATG ACGGGCATTC CCTGCGTGCG GCCCCCCTAC
GGCCACATCC GCGCGATCGA TCTCGCAACG GGGGAAACGG TCTGGGACCG CCCCTTCGGC
ACCGCGCGCC GCAACGGCCC CTTCGGCATC CCGTCCTACC TGCCGTTCGA CATCGGCACG
CCCAACAACG GCGGCTCGGT CGTGACCGCC GGCGGCGTGA TCTTCATCGG CGCCGCCACC
GACAACATCT TCCGGGCGAT CGATGTGGAG ACGGGCGAAA CGCTGTGGGA GGATGTCCTG
CCAGCGGGGG CCCAGGCCAA TCCCATCACC TACGAGGTCG ACGGCCGCCA GTATGTGATG
ATTGCCGCCG TCGGCCATCA TTTCATGGAG ACCGGAGTCG GCGACTGGAT GATCGCCTAT
GCGCTGCCGA AGTGA
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| Protein sequence | MPIHPIRSLP LLALIAATPL AAQVEPAPGL PEADVAPQQA EPAPDLQPGD DAPTGQTEQA
APEGAASSEG RSVAQAEAEA QAGVERPAQP QPEVGADWPF WGGDAQATRY SPLDEITPEN
VAGLERAFVY RTGDMPSGDA EGKYSPETTP LKVGDDLLMC SAMNILISID AETGEENWGY
DPGVPAEAIP YGASCRGVSI YTDPAASEGA LCATRVIEGT LDAKLVAVDA STGAPCEGFG
ENGTVDLWQD IGERVPGWYA VTAPPAVVRG ILVTGAQVKD GQAEDAPSGV IRGYDAVTGD
LVWAWDLAAP EANRAGPPEG EVYTRGTPNM WTTAVADEEL GYVYLPMGNS SVDYYGSNRS
EAENAYATSL VALDATTGEE VWHFQTVRHD VWDYDLGSQP TLLDWQGTPA ILLPSKQGDL
YILDRATGEP LTPVEELTGL PQGDVEPDFI SPTQPASAWA TLRMPPLEPK DAWGFTAIDQ
LWCRIQFHRA NYEGYFTPPS SDRPWIQYPG YNGGSDWGSV AVDSQRGLII ANYNDVPNYN
RLVPRDEVES VPIHEQESGA QSGQNAEGAA DPQAGSPYGI SVNAGWRNEM TGIPCVRPPY
GHIRAIDLAT GETVWDRPFG TARRNGPFGI PSYLPFDIGT PNNGGSVVTA GGVIFIGAAT
DNIFRAIDVE TGETLWEDVL PAGAQANPIT YEVDGRQYVM IAAVGHHFME TGVGDWMIAY
ALPK
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