Gene Rsph17029_3536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3536 
Symbol 
ID4899054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp619640 
End bp620254 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content68% 
IMG OID640114145 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001045399 
Protein GI126464286 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.595735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAGGGA TAGACAGTCT GACGGATGAG ACCTCCGGCA ACCGGTCCGG GCCCGAGGCG 
GCGACGGGGC AGGGCACGCC CCGGGCCGAC CTCGAGGCAC TGATCGCCTG TTGCGCCATG
GGTGACCGGG GCGCGTTCGA AACGCTCTAC GATGCCACCA GCGCGAAACT TCATGCGGTC
TGCTGCCGTA TCCTCGGGCG TGGACAGGGG GCCGAGGATG CGATGCAGGA TGCTTACGTC
AAGATCTGGA CCCATGCCGG TCGGTATCGG GTGACCGGCC ACTCGCCGAT GACCTGGCTC
ATCACGATCG CGCGCAACAC GGCCATCGAC CGGCTGCGGG CTCAGCGCAG GGGCGGTGAT
GTCACCGAAT ATCACGACGT CCATCCCGCC GCCGGATCCA ACCCGGAGAC GAGGATGCTC
GCGCGCGCCG AGGCGGGGCG CATCCGGGCC TGTCTGGACG AGCTGGGCGC GGACCGTCGC
CGCGCCATCA CCGGGGCCTA TCTGGATGGG TTGAGCTATG CGGACCTGGC GGACCGTGCC
GGAATTCCGC TGAATACCAT GCGCACATGG CTGAGACGCG GCCTCATGGC GCTCAAGGAC
TGCGTGGCCA GATGA
 
Protein sequence
MRGIDSLTDE TSGNRSGPEA ATGQGTPRAD LEALIACCAM GDRGAFETLY DATSAKLHAV 
CCRILGRGQG AEDAMQDAYV KIWTHAGRYR VTGHSPMTWL ITIARNTAID RLRAQRRGGD
VTEYHDVHPA AGSNPETRML ARAEAGRIRA CLDELGADRR RAITGAYLDG LSYADLADRA
GIPLNTMRTW LRRGLMALKD CVAR