| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3471 |
|---|
| Symbol | |
|---|
| ID | 4898346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | + |
|---|
| Start bp | 547752 |
|---|
| End bp | 548726 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640114068 |
|---|
| Product | deoxyribose-phosphate aldolase |
|---|
| Protein accession | YP_001045336 |
|---|
| Protein GI | 126464223 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
|---|
| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.267268 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCCC ACGCCATGCC CGACAGCCAC CCCCGCAACC CCGGCACGCC CTTCGCCCCC
GACTGGTTCG AGGAGATGCA GGTGAACCGC ACCGCGGCCG AGCGCCGCGC GACCACGATC
TCGGGCAGCC GCTCGGTCAA GAAGGATCAT CAGGCCGCCT GGCTCCTGCG CGCGATCCAG
TGCATCGACC TGACCACCCT GTCGGGCGAC GACACGCCGG GCAAGGTGCG CCGGCTCTGC
GCCAAGGCGC GCCAGCCCGT GCGGCCCGAC CTCTTGGAGG CGATGGGCGT GGGCGACATC
GGCCTGACCA CGGGGGCGGT CTGCGTCTAT CCGACGATGG TGCCCCATGC GGTGGCGGCC
CTTCAGGGCT CGGGCATTCC GGTGGCCTCG GTCGCCACGG GCTTTCCCGC CGGCCTGACG
CCGCTGTCGC AGCGGCTGGC CGAGATCACC TATGCCGTCG AGGCGGGCGC CTCCGAGATC
GACATCGTCA TCACCCGCGA ACATGTTCTG CTGGGCAACT GGCAGGCGCT CTACGACGAG
GTCGCGGCCA TGCGGGCCGC CTGCGGCGAG GCGCACATGA AGGCGATCCT CGCCACGGGC
GAGCTCGGCA CGCTGACGAA CGTCTACCGC GCCTCGATGG TCGCGATGCA GGCGGGGTCC
GACTTCATCA AGACCTCGAC CGGCAAGGAG ACCGAGAACG CCACCCTGCC CGTCTCGCTC
ACCATGCTGC GGGCGCTGAG GGACTATGCC GAGCGGACGG GCACTCGGAT CGGCTTCAAG
CCCGCCGGGG GCCTGCGCGC GGCCAAGGAC GCGCTGGCCT GGCTCGCGCT GATGAAGGAG
GAGCTGGGCC AGCCGTGGCT CAGGCCCGAC CTCTTCCGCA TCGGCGCCTC GACGCTGCTC
GGCGACATCG AGCGGCAACT CGAGCACCAC GTCACGGGGC GCTATGCCAG CGCCGACCAC
CACGCCCTGA GCTGA
|
|---|
| Protein sequence | MKAHAMPDSH PRNPGTPFAP DWFEEMQVNR TAAERRATTI SGSRSVKKDH QAAWLLRAIQ
CIDLTTLSGD DTPGKVRRLC AKARQPVRPD LLEAMGVGDI GLTTGAVCVY PTMVPHAVAA
LQGSGIPVAS VATGFPAGLT PLSQRLAEIT YAVEAGASEI DIVITREHVL LGNWQALYDE
VAAMRAACGE AHMKAILATG ELGTLTNVYR ASMVAMQAGS DFIKTSTGKE TENATLPVSL
TMLRALRDYA ERTGTRIGFK PAGGLRAAKD ALAWLALMKE ELGQPWLRPD LFRIGASTLL
GDIERQLEHH VTGRYASADH HALS
|
|---|
| |