Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3440 |
Symbol | |
ID | 4898697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 509656 |
End bp | 511290 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640114037 |
Product | FGGY-family pentulose kinase |
Protein accession | YP_001045305 |
Protein GI | 126464192 |
COG category | [C] Energy production and conversion |
COG ID | [COG1069] Ribulose kinase |
TIGRFAM ID | [TIGR01315] FGGY-family pentulose kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.243574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.308227 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCAGG ATCCCTCCCG TCCCGCGCCC GGCGCCGGTG ACGTGCTTCT CGGCATCGAC GTCGGCACCG GCAGTGCACG CGCGGGCCTG TTCGACCGCG CGGGCCGGAT GCTCGCCACG GCGAAATGCG ACATCGCGAT CTGGCGCGCG CCGGGCGCGA TGGTCGAGCA GTCGAGCCGC GACATCTGGC ACGCGGTCTG CCGCGCGACC CGCGCGGCGC TGGCCGAGGC GGGGCTGCCG CCCGAGGCGG TGGGCGGCGT GGGCTTCGAC GCCACCTGCT CGCTCGTCGT GGTGGGCGAG GGCGGCGCGC CGCTGCCGGT CGGGCCTTCC GAGGATCCCG AGCGCAACAT CATCGTCTGG ATGGATCACC GCGCCGTGGC GCAGGCCGAG CGGATCAATG CGCAGGGCCA CGAGGTGCTG CGCTATGTGG GCGGCCGCAT CTCGCCCGAG ATGGAGACGC CGAAGCTTCT GTGGCTGGCC GAGAACCGGC CCCAGATCTT CGCCCGCGCC TGGCAGTTCT TCGATCTCGC TGATTATCTC GGCTGGCGGG CGACGGGGGA TCTGGCGCGC TCGACCTGCA CCGTCACCTG CAAATGGACC TATCTCGCGC ATGAGCACCG CTGGGACGCG GGCTATTTCC GGCAGGTGGG GCTCGGGGTG CTGGCGGACG AGGGCTTCGT GCGGATCGGC GCCCGGGTGG TGGAGCCCGG CACGCCGTTG GGCCAAGGGC TGACGGCCGA GGCTGCGGCG GAGCTCGGCC TTCGTCCCGG CACGCCGGTG GGCGCGGGGC TGATCGACGC CCATGCCGGC GGGATCGGCA CCGTGGGCGC CGAGGGCACG CCCGAGCGCG ATCTGGCCTA TGTGTTCGGC ACCTCCTCCT GCACCATGAC CACCACGCGC GAGCCGGTCT TCGTGCCGGG CGTCTGGGGC CCCTACCGCT CGGCCATGGT GCCCGGCATG TGGCTGAACG AGGGCGGCCA GTCGGCCGCG GGCGCGGCGA TCGAGCAGCT TGTGTCCTTC CACCCCGCCG CGGCCGAGGC CGCCTGCGCC GCGGAGGCCC AGGGCGAGGC GCTGCCCGTC CATCTGGCCC GGCTGGCCGC CGAGGGGCTC GCGGATCTGT CAGAGGTGGC CACCCGCGCC GAGGGGCTGC ATGTGGTGCC CGAGTTCCTC GGCAACCGCG CGCCCTTCGC CGATCCCCAT GCGCGGGCGG TGATCGCGGG CCTCGGGATG GAGCGCGACC TGCCGAGCCT CGTGTCGCTC TATGTGGCGG GGATCTGCGG CATCGCCTAC GGGCTGCGCC AGATCCTCGA GGCGCAGGAG CGCGCGGGCG CCCCGGTCGA GCGGATCGCC ATCTCGGGCG GTGCGGGCCA GCTCGACATG GTGCGCCAGC TGCTGGCCGA TGCGACGGGC AAGCCCGTGC TGGCGAGCGC CGTGGCGGAG CCGGTGCTGC TCGGCTCGGC CATCCTCGGC GCGGTGGCGG CCGGGCACGA GCCCGACATG ACGGCCGCCA TGCAGCGCAT GTCGCGCACG GCCGCGCACT ACGAGCCCGC CGGGGGCGCT ATCGCCGCGC TGCACGACCG CCGCTATGCG GCCTTCCTCG CCCTGCAGGA GGCGGCCCGG GCCGCGCGCG GCTGA
|
Protein sequence | MTQDPSRPAP GAGDVLLGID VGTGSARAGL FDRAGRMLAT AKCDIAIWRA PGAMVEQSSR DIWHAVCRAT RAALAEAGLP PEAVGGVGFD ATCSLVVVGE GGAPLPVGPS EDPERNIIVW MDHRAVAQAE RINAQGHEVL RYVGGRISPE METPKLLWLA ENRPQIFARA WQFFDLADYL GWRATGDLAR STCTVTCKWT YLAHEHRWDA GYFRQVGLGV LADEGFVRIG ARVVEPGTPL GQGLTAEAAA ELGLRPGTPV GAGLIDAHAG GIGTVGAEGT PERDLAYVFG TSSCTMTTTR EPVFVPGVWG PYRSAMVPGM WLNEGGQSAA GAAIEQLVSF HPAAAEAACA AEAQGEALPV HLARLAAEGL ADLSEVATRA EGLHVVPEFL GNRAPFADPH ARAVIAGLGM ERDLPSLVSL YVAGICGIAY GLRQILEAQE RAGAPVERIA ISGGAGQLDM VRQLLADATG KPVLASAVAE PVLLGSAILG AVAAGHEPDM TAAMQRMSRT AAHYEPAGGA IAALHDRRYA AFLALQEAAR AARG
|
| |