Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3437 |
Symbol | |
ID | 4898531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 506803 |
End bp | 507600 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640114034 |
Product | ABC transporter related |
Protein accession | YP_001045302 |
Protein GI | 126464189 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.196667 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.174425 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCTGA TCTCCGCCGA GCAGCGCGGC CAGCCCATCC TGCGGCTCCG CGGCGTCTCG AAGCAGTTCG GCGCCGTCTC GGCGCTCGCC GACATCGAGC TCGACATCCA TCCGGGCGAG GTGGTGGCGC TGGTGGGCGA CAACGGCGCG GGCAAGTCCA CGCTGGTCAA GGTGCTGGCG GGGGTCCATC AGCCGACCTC GGGCACCATC GAATTCATGG GCAGGCCCGT CACGCTCGAC AGTCCGAGCA AGGCGCTCGA CCTCGGGATC GCGACCGTGT TCCAGGATCT CGCGCTCTGC GAGAATCTCG ACGTGGTGGC GAACCTCTTC CTCGGCCACG AGCTGTCACC CTGGCGGCTG GACGAGGTGG GGATGGAGGT CCGCGCCTGG ACGCTCCTGC GCGAGCTGGC GGCCCGCATC CCCTCGGTGC GCGAGCCCAT CGCCTCGCTC TCGGGCGGGC AGCGCCAGAC CGTGGCCATC GCGCGCTCGC TGCTGCTCGA TCCCAAGATC ATCATGCTCG ACGAGCCCAC CGCTGCGCTC GGCGTGGCGC AGACGGCCGA GGTGCTGAAC CTGATCGAGC GCGTCCGCGA CCGCGGGCTC GGCGTCATCA TCATCAGCCA CAACATGGAG GATGTGCGCG CCGTGGCCGA CCGGATCGTC GTGCTCCGGC TCGGGCGCAA CAACGGCACC TTCCCCGCCG ACACGTCGAA TAACGAGCTG GTCGCCGCCA TCACCGGCGC GACCGAAAAC TCCGTCTCGC GCCGTCAGGC CCGCAAGCAG CAGGAGGCCC AGGAGTGA
|
Protein sequence | MTLISAEQRG QPILRLRGVS KQFGAVSALA DIELDIHPGE VVALVGDNGA GKSTLVKVLA GVHQPTSGTI EFMGRPVTLD SPSKALDLGI ATVFQDLALC ENLDVVANLF LGHELSPWRL DEVGMEVRAW TLLRELAARI PSVREPIASL SGGQRQTVAI ARSLLLDPKI IMLDEPTAAL GVAQTAEVLN LIERVRDRGL GVIIISHNME DVRAVADRIV VLRLGRNNGT FPADTSNNEL VAAITGATEN SVSRRQARKQ QEAQE
|
| |