Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3406 |
Symbol | |
ID | 4898818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 473530 |
End bp | 474417 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640114003 |
Product | xylose isomerase domain-containing protein |
Protein accession | YP_001045271 |
Protein GI | 126464158 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.784337 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAAATC CTGTCGGCAT CATCTCGATG CAGTTCATCC GGCCCTTCAC CTCGGAGTCG CTGCATTTCC TGAAGAAGTC CCGGGCCCTG GGCTTCGATT TCATCGAGCT TCTCGTGCCC GAGCCCGAAG ACGGGCTCGA CGCGGCCGAG GTGCGGCGCA TCTGCGAGGG CGAGGGGCTG GGCCTCGTTC TGGCCGCGCG CGTGAACCTC CAGCGCTCGA TCGCGAGCGA GGAGGCCGCG GCGCGGGCCG GCGGGCGCGA CTATCTGAAA TACTGCATCG AGGCCGCCGA GGCGCTCGGC GCGACCATCG TCGGCGGCCC GCTCTATGGC GAGCCGCTGG TCTTCGCCGG CCGCCCGCCC TTCCCCTGGA CGGCCGAGCA GATCGCCACC CGCGCCGCCC GCACCGTCGA GGGGCTGGCC GAAGTGGCCC CGCTCGCCGC GAGCGCGGGC AAGGTCTTCG GGCTCGAGCC GCTGAACCGC TTCGAGACCG ACATCGTGAA CACGACCGCA CAGGCCATCG AGGTGGTGGA TGCGGTGGGC TCGCCCGGTC TCGGCGTCAT GCTCGACACG TTCCACATGA ACATGGAGGA ACGCTCGATC CCCGATGCGA TCCGCGCCAC AGGCGCGCGC CTCGTCCATT TTCAGGCCAA CGAGAACCAC CGCGGCTTCC CCGGCACCGG CACCATGGAC TGGACGGCCA TCGCGCGGGC GCTGGGGCAG GCGGGCTACG CGGGTCCGGT CTCGCTCGAG CCTTTCCGGC GCGACGACGA GCGCGTGGCG CTGCCCATCG CCCACTGGCG CGCCCCGCAC GAGGACGAGG ACGAGAAGCT GCGCGCGGGG CTGGGTCTCA TCCGCTCCGC GATCACCCTG GCGGAGGTGA CCCACTGA
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Protein sequence | MKNPVGIISM QFIRPFTSES LHFLKKSRAL GFDFIELLVP EPEDGLDAAE VRRICEGEGL GLVLAARVNL QRSIASEEAA ARAGGRDYLK YCIEAAEALG ATIVGGPLYG EPLVFAGRPP FPWTAEQIAT RAARTVEGLA EVAPLAASAG KVFGLEPLNR FETDIVNTTA QAIEVVDAVG SPGLGVMLDT FHMNMEERSI PDAIRATGAR LVHFQANENH RGFPGTGTMD WTAIARALGQ AGYAGPVSLE PFRRDDERVA LPIAHWRAPH EDEDEKLRAG LGLIRSAITL AEVTH
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