Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3345 |
Symbol | |
ID | 4898407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 398702 |
End bp | 400513 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640113944 |
Product | nuclease |
Protein accession | YP_001045213 |
Protein GI | 126464100 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.166956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0526297 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAGG ACTTCATCTC CCGAGGCGAT CTGCGCCTCA TCCCGCTCGC CGAGCTCCGG CTCTCGACCC TGAACAGCCG TCAGGAGATC GCGGCCGAGG AGGTCGAGGC CATGGCCGAG AGCCTCGCCG TGGCGGGGCT TCTCCAGAAC CTGATCGGCC ATCTGACGCC TTCCGGCGTC GAGATCGTGG GCGGCGGCAC CCGGCTCCGC GCGCTGCAGC GCCTCGCGGC CGAGGGCTGG AGCCGGCACC CGGATCTCAT TCCGATAGAT CCGGTGCCGG TGAAGGTGAC GGCCGACCTG CAGGAGGCGG TGGCCTGGGC GGGCACCGAG AACAGCGCCC GCTCGGCGCT GCACCCGGCC GACGAGGTCC GCGCCTATGC CGCGATGCGC GAGCGCGGTG CGAGCCTGTC GCGGATTGCG CGCAGCTTCG CGCGCTCCGA GGCCCATGTC GAGCGGCGCC TCAAGCTCGC GGATCTGCCG GCCGAGGCGC TGGCGGCACT CCGCGCGAAC GAGATCTCGC TCGAGATGGC GAAGGCGCTG ACGCTGGCGC CGAGCGGCGC GCGCTGCCTC GAAGTTCTCA CCTCGGTGCG GGGCCGCGAC GTGCGGCCCG AGCAGGTGCG GCGCGAGCTC ACGCCCGGCA CCGTGCCCTC GACCGACCGA CGGGCGGTCT TCGTGGGGAT CGAGGCCTAT CAGGCGGCCG GCGGAACCTC TCAGCGCGAT CTCTTCGCCG ACCGGACGCT GCTGGAGGAC GAGGCGCTCC TCGACCGGCT CTTCGCCGAG AAGGGGGCGG CCGAGGCGGA GCGGATCCGC GCGGAAGAGG GCTGGGAATG GGCGACATGG GTGCCGGAAG AATATGTCTC CTGGACCGTC ACGCAGAAGC TGGTGCGGCT CTACGCGCGG CCGGGGAAGC TCTCGGAAGG AGAGGAAGCG GAGCTCGCGG CGCTCGAGGA GCGCGAGACC GAGGACGCCC TCGACGAGGC CGGCCGCGCG CGCCTCACGG AGCTCGAGGC TCGCAGAGAG GGCGGCTTCA CCGACGCGCA GCGCGCTTCG GCCGGGATCT TCGTCTATTG CAGCAGCCGG GACGGGCTCT CGGTCGAGCG CGCCTATCAG CAGCCGCGGG CGGTCCCGCG CGGCGCGGCC GAGGCCGCGC CCGACCTGCC GCAATCGCTG ATCGAGGACC TGCACCGGAT CCGGCTCGGG GCGCTGCAGG CGCGGCTGAT GGATCAGTCC GAGCTCATGC TCGACCTGCT GGCCTTCTCG CTCGGCGGCG GCCTCCGCCC CTGGGCGCGC CCGCTCGCGG TCTCGCCGAC CGACCAGCCC ATCGCGCCGG AGAAGGCCGA CGGCACGCGT TACCCGCCGC GGCTGGCGGC ACGGCTCGAA CCGAATACGA GCCTCGGCCC GGACGGCACC CCGGCCGAGT TCGAGGCCTT CCGGGCGCTG GGGAAGAAGC ACCGCAACCA GATCCTGACC GAGGCGCTGG CGCGAACCTT CTGCACCGGC AGCTCCGGCC TCTCGGCGGC GCTCGCGCGC CAGCTCGGGG TGGAGGTGCG CCGGATCTGG ACGCCGACCG CCCAGGGCTT CCTCGGGCGC TGCAGCGCGG GCTATCTCGA CCGGCTCTGG AGCGAGCTCG TGCCGGCGGC CGAGGCGGAT CAGAGTTTCC AGAAGCTGAA GAAGGGGGAG AAGGCGAAGC GCCTCGAGGC GCTCTTCGCC GACCCCGCCA CCCGCGAGGC CCTCGGCCTC AACCGCGAGG ACTGCGCGAA GATCGACGCG TGGGTGCCGG CCGAGCTCGG CTTTCCGGAG GTGACAGAAT GA
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Protein sequence | MAKDFISRGD LRLIPLAELR LSTLNSRQEI AAEEVEAMAE SLAVAGLLQN LIGHLTPSGV EIVGGGTRLR ALQRLAAEGW SRHPDLIPID PVPVKVTADL QEAVAWAGTE NSARSALHPA DEVRAYAAMR ERGASLSRIA RSFARSEAHV ERRLKLADLP AEALAALRAN EISLEMAKAL TLAPSGARCL EVLTSVRGRD VRPEQVRREL TPGTVPSTDR RAVFVGIEAY QAAGGTSQRD LFADRTLLED EALLDRLFAE KGAAEAERIR AEEGWEWATW VPEEYVSWTV TQKLVRLYAR PGKLSEGEEA ELAALEERET EDALDEAGRA RLTELEARRE GGFTDAQRAS AGIFVYCSSR DGLSVERAYQ QPRAVPRGAA EAAPDLPQSL IEDLHRIRLG ALQARLMDQS ELMLDLLAFS LGGGLRPWAR PLAVSPTDQP IAPEKADGTR YPPRLAARLE PNTSLGPDGT PAEFEAFRAL GKKHRNQILT EALARTFCTG SSGLSAALAR QLGVEVRRIW TPTAQGFLGR CSAGYLDRLW SELVPAAEAD QSFQKLKKGE KAKRLEALFA DPATREALGL NREDCAKIDA WVPAELGFPE VTE
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