Gene Rsph17029_3313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3313 
Symbol 
ID4898110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp371248 
End bp372147 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content71% 
IMG OID640113912 
ProductHNH endonuclease 
Protein accessionYP_001045181 
Protein GI126464068 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.237766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGGC TCAGGAAGAT CCCGCAGCGG CTTGCCTCTG CGCCCGCACG TCTGGCACCG 
CTCTCAGGCG GTGACGGTCG CAGCAGAACC AAGGCTCGCC TGACGTTCTC GCCGTGGCGC
GCGTGGTATA ACACCGCCCG CTGGCGCGCT CTTCGGTGGG AGATCCTGAC CAAGGCGGCC
TTCACCTGCC GCCTGTGCGG CCGGATCGAG GGGAACACAT CGCAGCTCGT GGCTGACCAC
AAGGAGCCGC ACCGGGGCGA CGAGGCGCTG TTCTGGGATC GCGACAACCT GCAGTGTCTG
TGCAAGCCCT GCCATGACAG CGTGAAGCAG AGTGAGGAGC GCGCGCAGCC GCAGGCGGCA
TCGCCTGCTC CGATGGCACG GCCGGATTGG TTCCGGCCCG TGCATGTGCC GCTCACCATC
GTCGTGGGCC CGCCGGGCGC GGGCAAGTCG ACGTGGGTGA GAGCAGCGGC CGCACCCGAC
GATCTGGTCA TCTGCTTCGA GCAGATCACG CGCCGGGTGC TGGGGATTGA CCGTCTCAAT
GCGGAGGATG GCGACCGGCG CATCGGTGAT GTGCTGCGCC AGCGGAACGC CATGCTCGGC
GACCTGATGC GGGTCAGCGC CCGGGACCGG TGGCCGCGCG CATGGCTGAT CCTGACGGAG
CCGCGGGCCG ATCACCGGCA GTGGTGGGCG GATCGCCTGC GCCCCGAGCG GATCGTGGTG
CTGGCCACGC CGGAGGCAGA GTGCGTGCGC CGGTGCCAGG CCGATGCAGC CGCAGGAGAC
CGGCGAAAGG CGGGCATTGC CGCCGTCGTC GCGAGGTGGT GGGCCGACTA CAGCCCCCGG
CCCGGCGAGA TCGTCATCGC GCCCCCTCCC CCGGGGGTGG GTGCAAAGTC CGGGGAGTGA
 
Protein sequence
MARLRKIPQR LASAPARLAP LSGGDGRSRT KARLTFSPWR AWYNTARWRA LRWEILTKAA 
FTCRLCGRIE GNTSQLVADH KEPHRGDEAL FWDRDNLQCL CKPCHDSVKQ SEERAQPQAA
SPAPMARPDW FRPVHVPLTI VVGPPGAGKS TWVRAAAAPD DLVICFEQIT RRVLGIDRLN
AEDGDRRIGD VLRQRNAMLG DLMRVSARDR WPRAWLILTE PRADHRQWWA DRLRPERIVV
LATPEAECVR RCQADAAAGD RRKAGIAAVV ARWWADYSPR PGEIVIAPPP PGVGAKSGE